RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC01049-201ENST00000426840 FZR1Q9UM11 496 aa6.35□□□□□ -1.39
LINC01049-201ENST00000426840 EDARQ9UNE0 448 aa6.35□□□□□ -1.39
LINC01049-201ENST00000426840 TMEM14AQ9Y6G1 99 aa6.35□□□□□ -1.39
LINC01049-201ENST00000426840 HSPE1-MOB4S4R3N1 261 aa6.35□□□□□ -1.39
LINC01049-201ENST00000426840 POLQO75417 2590 aa6.35□□□□□ -1.39
LINC01049-201ENST00000426840 ARID1AO14497 2285 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 PRRC2AP48634 2157 aaKnown RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 A0A1W2PQL4 384 aaPredicted RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 SHISA3A0PJX4 238 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF670-ZNF695F2Z2N8 137 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 M0R135 149 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 PSMD9O00233 223 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 IGHV3-13P01766 116 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 LCATP04180 440 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 H2BFMP0C1H6 154 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 DBTP11182 482 aaKnown RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 PAX1P15863 534 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 JUNBP17275 347 aaPredicted RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 SLC15A1P46059 708 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 RPS23P62266 143 aaKnown RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 GRB2P62993 217 aaKnown RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF85Q03923 595 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 TAF13Q15543 124 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 DEFB113Q30KQ7 82 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ALKBH6Q3KRA9 238 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 SPATA46Q5T0L3 261 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 C6orf52Q5T4I8 152 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 MBNL2Q5VZF2 373 aaKnown RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 KCTD18Q6PI47 426 aaPredicted RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 DRAM2Q6UX65 266 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 LRRN1Q6UXK5 716 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 UNQ6126/PRO20091Q6UXV3 157 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 SSX6Q7RTT6 188 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 KRT77Q7Z794 578 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF679Q8IYX0 411 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF283Q8N7M2 679 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 CELF2-AS1Q8N7Q2 184 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 SETD9Q8NE22 299 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ABHD4Q8TB40 342 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 CNIH3Q8TBE1 160 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 SYNPRQ8TBG9 265 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 KLF14Q8TD94 323 aaPredicted RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ASB17Q8WXJ9 295 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 SPTSSAQ969W0 71 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 APOBEC3DQ96AK3 386 aaPredicted RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 CMBLQ96DG6 245 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 LGALS12Q96DT0 336 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF799Q96GE5 643 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 Q96MT0 163 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 OR8B4Q96RC9 309 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 TBX5Q99593 518 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 CCL19Q99731 98 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 SYT3Q9BQG1 590 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF649Q9BS31 505 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 COPS4Q9BT78 406 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 FAIMQ9NVQ4 179 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 BEX4Q9NWD9 120 aaPredicted RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF319Q9P2F9 582 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 MRM2Q9UI43 246 aaKnown RBP6.34□□□□□ -1.39
LINC01049-201ENST00000426840 DUSP13Q9UII6 198 aa6.34□□□□□ -1.39
LINC01049-201ENST00000426840 PDZD2O15018 2839 aa6.34□□□□□ -1.4
LINC01049-201ENST00000426840 SNTNA6NMZ2 147 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 H3BSA7 217 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 PHYHO14832 338 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 NDUFS7O75251 213 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 ZNF254O75437 659 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 SRSF10O75494 262 aaKnown RBP6.33□□□□□ -1.4
LINC01049-201ENST00000426840 PNPP00491 289 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 APOC1P02654 83 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 ADRA2AP08913 450 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 SLC2A1P11166 492 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 RAC2P15153 192 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 DCTDP32321 178 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 ATP6V1E1P36543 226 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 CDKN1AP38936 164 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 VHLP40337 213 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 MMP15P51511 669 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 CXCR4P61073 352 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 ZNF91Q05481 1191 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 EGR3Q06889 387 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 PSG7Q13046 419 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 SNAI3Q3KNW1 292 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 ZNF322Q6U7Q0 402 aaPredicted RBP6.33□□□□□ -1.4
LINC01049-201ENST00000426840 IZUMO2Q6UXV1 221 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 FBXW12Q6X9E4 464 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.33□□□□□ -1.4
LINC01049-201ENST00000426840 C8orf59Q8N0T1 100 aaPredicted RBP6.33□□□□□ -1.4
LINC01049-201ENST00000426840 ZCCHC24Q8N2G6 241 aaKnown RBP6.33□□□□□ -1.4
LINC01049-201ENST00000426840 OR10H4Q8NGA5 316 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 OR52I1Q8NGK6 324 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 OR5L1Q8NGL2 311 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 FAM168AQ92567 244 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 PPP1R14AQ96A00 147 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 SGK3Q96BR1 496 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 COG8Q96MW5 612 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 CACNG6Q9BXT2 260 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 TTTY10Q9BZA0 68 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 VCX3BQ9H321 246 aa6.33□□□□□ -1.4
LINC01049-201ENST00000426840 NIPAL2Q9H841 368 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms