RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 HMGN1P05114 100 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 PCMT1P22061 227 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 SLC6A9P48067 706 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 BTG1P62324 171 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 EIF2B1Q14232 305 aaKnown RBP15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 KRTAP24-1Q3LI83 254 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 TMEM155Q4W5P6 130 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 FAHD1Q6P587 224 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 PRSS45Q7RTY3 260 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 MOGAT3Q86VF5 341 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 ERI1Q8IV48 349 aaKnown RBP15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 CPOQ8IVL8 374 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 BBS1Q8NFJ9 593 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 OR6N2Q8NGY6 317 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 SPATA3Q8NHX4 192 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 RNF133Q8WVZ7 376 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 ZMYND19Q96E35 227 aaPredicted RBP15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 ABHD6Q9BV23 337 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 TMEM165Q9HC07 324 aa15.41■□□□□ 0.06
SMARCAL1-205ENST00000425815 ZNF878C9JN71 531 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 PRR23D1E9PI22 279 aaPredicted RBP15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 ZNF205O95201 554 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 CYB5R3P00387 301 aaPredicted RBP15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 PRR23D2P0DMB1 279 aaPredicted RBP15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 SRP14P37108 136 aaKnown RBP15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 GATA4P43694 442 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 SRP9P49458 86 aaKnown RBP15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 RAD23AP54725 363 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 LCN2P80188 198 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 TAF13Q15543 124 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 MRPL21Q7Z2W9 205 aaKnown RBP15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 TMEM158Q8WZ71 300 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 SPSB4Q96A44 273 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 PATZ1Q9HBE1 687 aaKnown RBP15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 SLC25A19Q9HC21 320 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 ZNF319Q9P2F9 582 aa15.4■□□□□ 0.06
SMARCAL1-205ENST00000425815 F5H0A9 414 aaPredicted RBP15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 SELENOFO60613 162 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 ATP5HO75947 161 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 PNPP00491 289 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 SLC2A5P22732 501 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 CA6P23280 308 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 OPRL1P41146 370 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 CD200P41217 278 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 CRISP1P54107 249 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 SEC61A1P61619 476 aaKnown RBP15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 ZNF181Q2M3W8 571 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 FAM201AQ5SY85 155 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 CELF2-AS1Q8N7Q2 184 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 OR5K1Q8NHB7 308 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 SPRYD4Q8WW59 207 aaPredicted RBP15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 SGK3Q96BR1 496 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 DUS3LQ96G46 650 aaKnown RBP15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 METTL17Q9H7H0 456 aaPredicted RBP15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 MMP26Q9NRE1 261 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 OPN4Q9UHM6 478 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 N6AMT1Q9Y5N5 214 aa15.39■□□□□ 0.05
SMARCAL1-205ENST00000425815 LOC105371242A0A075B767 164 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 IFNL4K9M1U5 179 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 MITFO75030 526 aaPredicted RBP15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 WNT2P09544 360 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 PAICSP22234 425 aaKnown RBP15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 CX3CR1P49238 355 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 RASSF2P50749 326 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 GRB2P62993 217 aaKnown RBP15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 HOXA4Q00056 320 aaPredicted RBP15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 MPPED2Q15777 294 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 ATP6AP1Q15904 470 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 PRAMEF6Q5VXH4 476 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 SHFQ7M4L6 423 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 OTOSQ8NHW6 89 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 Q8TCH9 128 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 MMADHCQ9H3L0 296 aaPredicted RBP15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 TOR3AQ9H497 397 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 PAPOLBQ9NRJ5 636 aaKnown RBP15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 TVP23BQ9NYZ1 205 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 KLHDC2Q9Y2U9 406 aa15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 POLR3KQ9Y2Y1 108 aaPredicted RBP15.38■□□□□ 0.05
SMARCAL1-205ENST00000425815 A0A0G2JMP0 313 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 A0A0X1KG70 313 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 GGT3PA6NGU5 568 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 CEACAM18A8MTB9 384 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 TRAPPC2LH3BP13 241 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 PTBP3O95758 552 aaKnown RBP15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 MDH2P40926 338 aaKnown RBP15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 SLC15A1P46059 708 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 HCCSP53701 268 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 EFNB1P98172 346 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 FAM3AP98173 230 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 PTGES3Q15185 160 aaKnown RBP15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 KLHL12Q53G59 568 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 RHOUQ7L0Q8 258 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 AMIGO2Q86SJ2 522 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 PARP8Q8N3A8 854 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 KLHL36Q8N4N3 616 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 SPICQ8N5J4 248 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 OR4M2Q8NGB6 313 aa15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 DVL3Q92997 716 aaPredicted RBP15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 MRPL15Q9P015 296 aaKnown RBP15.37■□□□□ 0.05
SMARCAL1-205ENST00000425815 METRNQ9UJH8 293 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms