RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ADAT1Q9BUB4 502 aaKnown RBP13.47□□□□□ -0.25
COL18A1-205ENST00000423214 SLITRK2Q9H156 845 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 FN3KRPQ9HA64 309 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 NDE1Q9NXR1 346 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 A0A1B0GWJ7 208 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 M0R135 149 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 ARPC3O15145 178 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 OR10H3O60404 316 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 FABP3P05413 133 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 CRYBA1P05813 215 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 OMGP23515 440 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 IFNGR2P38484 337 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 NPY4RP50391 375 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 MAB21L1Q13394 359 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 DEFB112Q30KQ8 113 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 RFX4Q33E94 735 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 KRTAP27-1Q3LI81 207 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 LYPD2Q6UXB3 125 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 CCDC197Q8NCU1 140 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 Q8TCH9 128 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 TAF15Q92804 592 aaKnown RBP eCLIP13.46□□□□□ -0.25
COL18A1-205ENST00000423214 SPTSSAQ969W0 71 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 ZNF799Q96GE5 643 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 PCGF1Q9BSM1 259 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 SLC22A4Q9H015 551 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 TNFRSF19Q9NS68 423 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 CYB5R1Q9UHQ9 305 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 KCNG2Q9UJ96 466 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 TMCC3Q9ULS5 477 aa13.46□□□□□ -0.25
COL18A1-205ENST00000423214 SOX21Q9Y651 276 aaPredicted RBP13.46□□□□□ -0.25
COL18A1-205ENST00000423214 FAM107AO95990 144 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 KNG1P01042 644 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 ZNF823P16415 610 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 ATP6V1B2P21281 511 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 RRM2P31350 389 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 GGT2P36268 569 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 PMELP40967 661 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 MNAT1P51948 309 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 DBPQ10586 325 aaPredicted RBP13.45□□□□□ -0.26
COL18A1-205ENST00000423214 RSPO1Q2MKA7 263 aaPredicted RBP13.45□□□□□ -0.26
COL18A1-205ENST00000423214 CLEC12AQ5QGZ9 265 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 ZBTB46Q86UZ6 589 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 ZDHHC21Q8IVQ6 265 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 BOLLQ8N9W6 283 aaKnown RBP13.45□□□□□ -0.26
COL18A1-205ENST00000423214 OR52L1Q8NGH7 329 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 IL1RAPQ9NPH3 570 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 TRIM36Q9NQ86 728 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 RNF7Q9UBF6 113 aa13.45□□□□□ -0.26
COL18A1-205ENST00000423214 GGT3PA6NGU5 568 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 SRRM5B3KS81 715 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 C22orf46C9J442 243 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 IDH3BO43837 385 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 T-ENOLP0DO92 83 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 CA6P23280 308 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 BPIFB3P59826 476 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 OR8B8Q15620 311 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 MPPED2Q15777 294 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 CD276Q5ZPR3 534 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 ZNF620Q6ZNG0 422 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 C17orf107Q6ZR85 190 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 PROKR2Q8NFJ6 384 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 MARCH7Q9H992 704 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 NOX4Q9NPH5 578 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 PNRC2Q9NPJ4 139 aaKnown RBP13.44□□□□□ -0.26
COL18A1-205ENST00000423214 ERVK-18Q9QC07 812 aa13.44□□□□□ -0.26
COL18A1-205ENST00000423214 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-205ENST00000423214 A0A1B0GUS0 222 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 OR6C68A6NDL8 312 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 FAM181BA6NEQ2 426 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 P2RY10O00398 339 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 ADAM20O43506 726 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 GMDSO60547 372 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 PSMB10P40306 273 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 RAG2P55895 527 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.43□□□□□ -0.26
COL18A1-205ENST00000423214 SPATS1Q496A3 300 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 ZNF362Q5T0B9 420 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-205ENST00000423214 SLC35F1Q5T1Q4 408 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 RUSC1-AS1Q66K80 236 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 SFRP4Q6FHJ7 346 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-205ENST00000423214 FIP1L1Q6UN15 594 aaKnown RBP13.43□□□□□ -0.26
COL18A1-205ENST00000423214 ZNF841Q6ZN19 808 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 NAA40Q86UY6 237 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 OR4C15Q8NGM1 316 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 OR2AE1Q8NHA4 323 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 COPS4Q9BT78 406 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 BEX1Q9HBH7 125 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 ACTR3BQ9P1U1 418 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 CTSZQ9UBR2 303 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 MMP24Q9Y5R2 645 aa13.43□□□□□ -0.26
COL18A1-205ENST00000423214 WNK1Q9H4A3 2382 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 A6NLC8 198 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 CD300LBA8K4G0 201 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 ZNF879B4DU55 563 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 C3orf80F5H4A9 247 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 LGALS8O00214 317 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 TOX4O94842 621 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 SFTPBP07988 381 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 CALB2P22676 271 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms