RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 J3QLW9 94 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 RPP14O95059 124 aaKnown RBP14.58□□□□□ -0.08
COL7A1-202ENST00000422991 TACSTD2P09758 323 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 ZNF19P17023 458 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 MPV17P39210 176 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 EFNB3Q15768 340 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 ZNF718Q3SXZ3 478 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 TMEM255AQ5JRV8 349 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 GLYATL3Q5SZD4 288 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 RNLSQ5VYX0 342 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 FBXW12Q6X9E4 464 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 DTX2Q86UW9 622 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 LRP11Q86VZ4 500 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 MUC15Q8N387 334 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 OR52N1Q8NH53 320 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 SYNPRQ8TBG9 265 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 RORBQ92753 470 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 PELI1Q96FA3 418 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 PGAM5Q96HS1 289 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 OR10A2Q9H208 303 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 G6PC2Q9NQR9 355 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 ERVK-18Q9QC07 812 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 NUFIP1Q9UHK0 495 aaKnown RBP14.58□□□□□ -0.08
COL7A1-202ENST00000422991 DSCAMO60469 2012 aa14.58□□□□□ -0.08
COL7A1-202ENST00000422991 TMEM129A0AVI4 362 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 VSTM5A8MXK1 200 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 TBX1O43435 398 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 XRCC2O43543 280 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 RGS10O43665 173 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 MT-ND5P03915 603 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 SOD3P08294 240 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 HTR1AP08908 422 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 GCH1P30793 250 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 PSMB10P40306 273 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 KLF3P57682 345 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-202ENST00000422991 GABARAPL2P60520 117 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 MALLQ13021 153 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 GK2Q14410 553 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-202ENST00000422991 HLXQ14774 488 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-202ENST00000422991 MST1LQ2TV78 715 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 BCL2L15Q5TBC7 163 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 OR2G6Q5TZ20 316 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 FDX2Q6P4F2 183 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 PAMR1Q6UXH9 720 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 TMPRSS11AQ6ZMR5 421 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 CATSPERDQ86XM0 798 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 KLHL36Q8N4N3 616 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 OR2AE1Q8NHA4 323 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 IGFBPL1Q8WX77 278 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 NRGNQ92686 78 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 SPSB4Q96A44 273 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 SYT3Q9BQG1 590 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 TRAF4Q9BUZ4 470 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-202ENST00000422991 CDCA4Q9BXL8 241 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 YTHDF1Q9BYJ9 559 aaKnown RBP14.57□□□□□ -0.08
COL7A1-202ENST00000422991 PBOV1Q9GZY1 135 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 LIME1Q9H400 295 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 PLK3Q9H4B4 646 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 CHCHD3Q9NX63 227 aaKnown RBP14.57□□□□□ -0.08
COL7A1-202ENST00000422991 MYEF2Q9P2K5 600 aaKnown RBP14.57□□□□□ -0.08
COL7A1-202ENST00000422991 LRCH1Q9Y2L9 728 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 SNX5Q9Y5X3 404 aa14.57□□□□□ -0.08
COL7A1-202ENST00000422991 B9A039 149 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 ATE1O95260 518 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 CLPTM1O96005 669 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 CD8AP01732 235 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 IGHV3-13P01766 116 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 MT-ND2P03891 347 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 RAC2P15153 192 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 EVX1P49640 407 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 ZNF92Q03936 586 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 PSG7Q13046 419 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 IRF3Q14653 427 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 TIGD6Q17RP2 521 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 SWI5Q1ZZU3 235 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 AGAP6Q5VW22 663 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 C11orf71Q6IPW1 123 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 PRSS48Q7RTY5 328 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 ZNF485Q8NCK3 441 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 SPRYD4Q8WW59 207 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-202ENST00000422991 CMBLQ96DG6 245 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 OPA3Q9H6K4 179 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 CBLN4Q9NTU7 201 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 DUSP13Q9UII6 198 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 OR52A1Q9UKL2 312 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 GTF2A1LQ9UNN4 478 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 ARFGEF3Q5TH69 2177 aa14.56□□□□□ -0.08
COL7A1-202ENST00000422991 OTOGQ6ZRI0 2925 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 A0A0U1RQV5 110 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 MYL12BO14950 172 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 TTRP02766 147 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 KITLGP21583 273 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 KIR3DL2P43630 455 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 SELENOVP59797 346 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 MRPL28Q13084 256 aaKnown RBP14.55□□□□□ -0.08
COL7A1-202ENST00000422991 GFOD2Q3B7J2 385 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 MRPL21Q7Z2W9 205 aaKnown RBP14.55□□□□□ -0.08
COL7A1-202ENST00000422991 ELMOD2Q8IZ81 293 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 PRSS35Q8N3Z0 413 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 NANOGP1Q8N7R0 232 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms