RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 OR7A5Q15622 319 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 CCDC153Q494R4 210 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 CCDC92Q53HC0 331 aaPredicted RBP3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 LBHQ53QV2 105 aaPredicted RBP3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 CFAP157Q5JU67 520 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 SAXO2Q658L1 398 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 C8orf74Q6P047 294 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 C16orf62Q7Z3J2 963 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 MDP1Q86V88 176 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 LRP11Q86VZ4 500 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 TMEM219Q86XT9 240 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 CLECL1Q8IZS7 167 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 TMEM123Q8N131 208 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 BPIFB2Q8N4F0 458 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 OR4M2Q8NGB6 313 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 OR8J2Q8NGG1 315 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 OR8H1Q8NGG4 311 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 OR5M8Q8NGP6 311 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 NANPQ8TBE9 248 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 MGARPQ8TDB4 240 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 TMEM255BQ8WV15 326 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 TWIST2Q8WVJ9 160 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 PHF21AQ96BD5 680 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 NEURL3Q96EH8 262 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 SLC35G5Q96KT7 338 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 TRNT1Q96Q11 434 aaKnown RBP3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 ATP6V0BQ99437 205 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 SLC38A1Q9H2H9 487 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 LRMDAQ9H2I8 198 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 OR51I1Q9H343 314 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 ZNF665Q9H7R5 613 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 CDH20Q9HBT6 801 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 DNAJC4Q9NNZ3 241 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 DDX28Q9NUL7 540 aaKnown RBP3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 MED29Q9NX70 200 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 MYEF2Q9P2K5 600 aaKnown RBP3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 B3GAT1Q9P2W7 334 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 PYCARDQ9ULZ3 195 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 RASD1Q9Y272 281 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 MMP24Q9Y5R2 645 aa3.87□□□□□ -1.79
CDC42EP3-202ENST00000422687 IGLV3-9A0A075B6K5 115 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 CFAP73A6NFT4 308 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 DNAJC9-AS1A6NH13 148 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 A8MVM7 634 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 ZNF99A8MXY4 864 aaPredicted RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 HMGN4O00479 90 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 RIPK2O43353 540 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 PPIHO43447 177 aaKnown RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 PEX11AO75192 247 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 KRT33AO76009 404 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 SNRNP70P08621 437 aaKnown RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 PNMTP11086 282 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 ZNF250P15622 560 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 ZNF12P17014 697 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 TCN1P20061 433 aaPredicted RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 UQCRC2P22695 453 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 SOAT1P35610 550 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 CRYBB2P43320 205 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 ALDH3B1P43353 468 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 STX1BP61266 288 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 RPS23P62266 143 aaKnown RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 ZP4Q12836 540 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 CASP8Q14790 479 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 MAD2L1BPQ15013 274 aaPredicted RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 MAPK11Q15759 364 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 NPTX1Q15818 432 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 CEACAM16Q2WEN9 425 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 KLF17Q5JT82 389 aaPredicted RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 MRPL2Q5T653 305 aaKnown RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 ATAD3BQ5T9A4 648 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 C1orf140Q5VVS0 124 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 IL23RQ5VWK5 629 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 TMEM225Q6GV28 225 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 NIPAL3Q6P499 406 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 LRRC74BQ6ZQY2 392 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 C9orf139Q6ZV77 190 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 TRMT10CQ7L0Y3 403 aaKnown RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 C10orf107Q8IVU9 208 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 ZNF440Q8IYI8 595 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 CLEC4FQ8N1N0 589 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 GBGT1Q8N5D6 347 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 SIGLECL1Q8N7X8 197 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 DEFB108BQ8NET1 73 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 MFSD8Q8NHS3 518 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 SSMEM1Q8WWF3 244 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 RAB8BQ92930 207 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 RAB39BQ96DA2 213 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 LRR1Q96L50 414 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 OXGR1Q96P68 337 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 OR2M2Q96R28 347 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 RSPO3Q9BXY4 272 aaPredicted RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 NARFLQ9H6Q4 476 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 MTHFD2LQ9H903 347 aaPredicted RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 CRLF2Q9HC73 371 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 PSMC3IPQ9P2W1 217 aaPredicted RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 ZNF346Q9UL40 294 aaKnown RBP3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 OR2W1Q9Y3N9 320 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 PPIAL4AQ9Y536 164 aa3.86□□□□□ -1.79
CDC42EP3-202ENST00000422687 IGLV5-37A0A075B6J1 123 aa3.85□□□□□ -1.79
CDC42EP3-202ENST00000422687 A0A096LPI6 279 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms