RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 C5orf63A6NC05 138 aa22.33■■□□□ 1.17
CDK9-202ENST00000421939 LYNP07948 512 aa22.33■■□□□ 1.17
CDK9-202ENST00000421939 ZNF92Q03936 586 aa22.33■■□□□ 1.17
CDK9-202ENST00000421939 C12orf73Q69YU5 71 aa22.33■■□□□ 1.17
CDK9-202ENST00000421939 RHOUQ7L0Q8 258 aa22.33■■□□□ 1.17
CDK9-202ENST00000421939 TMEM100Q9NV29 134 aa22.33■■□□□ 1.17
CDK9-202ENST00000421939 CDC42EP3Q9UKI2 254 aa22.33■■□□□ 1.17
CDK9-202ENST00000421939 A0A1B0GWJ7 208 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 CCDC182A6NF36 153 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 H3BNX3 289 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 M0R129 80 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 MLNRO43193 412 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 ANXA2P07355 339 aaKnown RBP22.32■■□□□ 1.16
CDK9-202ENST00000421939 LMO4P61968 165 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 HNRNPA0Q13151 305 aaKnown RBP22.32■■□□□ 1.16
CDK9-202ENST00000421939 CHRFAM7AQ494W8 412 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 LCN1P1Q5VSP4 162 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 SPRYD4Q8WW59 207 aaPredicted RBP22.32■■□□□ 1.16
CDK9-202ENST00000421939 MEGF10Q96KG7 1140 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 PKP2Q99959 881 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 REPIN1Q9BWE0 567 aaKnown RBP22.32■■□□□ 1.16
CDK9-202ENST00000421939 TMEM106BQ9NUM4 274 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 DCAF16Q9NXF7 216 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 PPP1R3CQ9UQK1 317 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 N6AMT1Q9Y5N5 214 aa22.32■■□□□ 1.16
CDK9-202ENST00000421939 CD300LBA8K4G0 201 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 B4DSR2 109 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 H0YL77 283 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 APOC1P02654 83 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 H2BFMP0C1H6 154 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 SLC16A9Q7RTY1 509 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 PEG10Q86TG7 708 aaKnown RBP22.31■■□□□ 1.16
CDK9-202ENST00000421939 THEM6Q8WUY1 208 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 RBM4BQ9BQ04 359 aaKnown RBP22.31■■□□□ 1.16
CDK9-202ENST00000421939 OSBPL10Q9BXB5 764 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 GABARAPL3Q9BY60 117 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 OPA3Q9H6K4 179 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 DNAJC27Q9NZQ0 273 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 KLHDC2Q9Y2U9 406 aa22.31■■□□□ 1.16
CDK9-202ENST00000421939 XRCC2O43543 280 aa22.3■■□□□ 1.16
CDK9-202ENST00000421939 SRP9P49458 86 aaKnown RBP22.3■■□□□ 1.16
CDK9-202ENST00000421939 TCEANCQ8N8B7 351 aa22.3■■□□□ 1.16
CDK9-202ENST00000421939 TMEM163Q8TC26 289 aa22.3■■□□□ 1.16
CDK9-202ENST00000421939 RAB39BQ96DA2 213 aa22.3■■□□□ 1.16
CDK9-202ENST00000421939 TEAD3Q99594 435 aa22.3■■□□□ 1.16
CDK9-202ENST00000421939 ZNF665Q9H7R5 613 aa22.3■■□□□ 1.16
CDK9-202ENST00000421939 SP140LQ9H930 580 aa22.3■■□□□ 1.16
CDK9-202ENST00000421939 LPAR3Q9UBY5 353 aa22.3■■□□□ 1.16
CDK9-202ENST00000421939 DYSFO75923 2080 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 ISPDA4D126 451 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 GGT3PA6NGU5 568 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 FAM157AC9JC47 383 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 F5H5P2 479 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 TBX1O43435 398 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 HLA-DPB1P04440 258 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 MRPL3P09001 348 aaKnown RBP22.29■■□□□ 1.16
CDK9-202ENST00000421939 MMP16P51512 607 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 ZNF121P58317 390 aaPredicted RBP22.29■■□□□ 1.16
CDK9-202ENST00000421939 PRSS45Q7RTY3 260 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 PRIMA1Q86XR5 153 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 C10orf67Q8IYJ2 551 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 SPSB4Q96A44 273 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 RAB3IPQ96QF0 476 aaPredicted RBP22.29■■□□□ 1.16
CDK9-202ENST00000421939 GAL3ST1Q99999 423 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 YIPF3Q9GZM5 350 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 SHARPINQ9H0F6 387 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 RIBC2Q9H4K1 309 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 GCM1Q9NP62 436 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 LAMP5Q9UJQ1 280 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 NOP16Q9Y3C1 178 aaKnown RBP22.29■■□□□ 1.16
CDK9-202ENST00000421939 NPTNQ9Y639 398 aa22.29■■□□□ 1.16
CDK9-202ENST00000421939 IGHV2-5P01817 119 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 ALOX5APP20292 161 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 DVL1P1P54792 670 aaPredicted RBP22.28■■□□□ 1.16
CDK9-202ENST00000421939 EFNB1P98172 346 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 TIGD6Q17RP2 521 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 FAM57BQ71RH2 274 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 BCDIN3DQ7Z5W3 292 aaKnown RBP22.28■■□□□ 1.16
CDK9-202ENST00000421939 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.28■■□□□ 1.16
CDK9-202ENST00000421939 OR56B2PQ8NGI1 322 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 OR52H1Q8NGJ2 320 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 BEX2Q9BXY8 128 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 SLC22A4Q9H015 551 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 SVEP1Q4LDE5 3571 aa22.28■■□□□ 1.16
CDK9-202ENST00000421939 IFNL4K9M1U5 179 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 MSMBP08118 114 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 POLR2IP36954 125 aaKnown RBP22.27■■□□□ 1.16
CDK9-202ENST00000421939 FAM120AOSQ5T036 256 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 AADACL4Q5VUY2 407 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 NXNL2Q5VZ03 156 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 LRRN1Q6UXK5 716 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 SIGLEC11Q96RL6 698 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 IL4I1Q96RQ9 567 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 CNN2Q99439 309 aaKnown RBP22.27■■□□□ 1.16
CDK9-202ENST00000421939 LPAR2Q9HBW0 351 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 BRD7Q9NPI1 651 aa22.27■■□□□ 1.16
CDK9-202ENST00000421939 MRPL15Q9P015 296 aaKnown RBP22.27■■□□□ 1.16
CDK9-202ENST00000421939 IGHV3-64DA0A0J9YX35 117 aa22.26■■□□□ 1.15
CDK9-202ENST00000421939 SLC22A31A6NKX4 558 aa22.26■■□□□ 1.15
CDK9-202ENST00000421939 IGHV2-70P01814 119 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms