RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 OPA3Q9H6K4 179 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 NOX3Q9HBY0 568 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 CCDC59Q9P031 241 aaKnown RBP12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 OSGIN2Q9Y236 505 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 MAST4O15021 2626 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 A0A1B0GTI1 187 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 F5H5K5 113 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 CCL21O00585 134 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 ALX3O95076 343 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 FSTP19883 344 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 CFPP27918 469 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 PRKXP51817 358 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 GALK2Q01415 458 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 MRPL49Q13405 166 aaKnown RBP12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 DYNC1I2Q13409 638 aaKnown RBP12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 C22orf42Q6IC83 251 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 DOK3Q7L591 496 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 CROCCP3Q8IVE0 287 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 PARP16Q8N5Y8 322 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR8B12Q8NGG6 310 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 LILRB4Q8NHJ6 448 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 DCSTAMPQ9H295 470 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZNF275Q9NSD4 429 aaPredicted RBP12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZNF319Q9P2F9 582 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 FOXJ3Q9UPW0 622 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 SPTAN1Q13813 2472 aaKnown RBP12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 HIVEP3Q5T1R4 2406 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 SVILO95425 2214 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 A0A1W2PPW3 197 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 WIPF3A6NGB9 483 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 C16orf97H3BN30 126 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 LRRTM2O43300 516 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 XRCC2O43543 280 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 AGFG2O95081 481 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 CD2P06729 351 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 DBHP09172 617 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 OCM2P0CE71 109 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 IL32P24001 234 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 APLNRP35414 380 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 ASCL1P50553 236 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 HGFACQ04756 655 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 C4orf17Q53FE4 359 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZBTB37Q5TC79 503 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZNF529Q6P280 563 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 UNQ6126/PRO20091Q6UXV3 157 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 APOBEC3DQ96AK3 386 aaPredicted RBP12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 NXF2Q9GZY0 626 aaKnown RBP12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 PPIL3Q9H2H8 161 aaKnown RBP12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 EXOSC4Q9NPD3 245 aaKnown RBP12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 COQ3Q9NZJ6 369 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 V9GYS6 101 aa12.37□□□□□ -0.43
SHMT1P1-201ENST00000419974 SPTBN1Q01082 2364 aaKnown RBP12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 NAV2Q8IVL1 2488 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 LOC107986453A0A1B0GWG9 222 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 PIN1P1O15428 100 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 SYT7O43581 403 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 MTRF1O75570 445 aaKnown RBP12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 ANXA2P07355 339 aaKnown RBP12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZNF35P13682 527 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 IGFBP3P17936 291 aaPredicted RBP12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 SRMP19623 302 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 NR4A1P22736 598 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 APEX1P27695 318 aaKnown RBP12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 PSMD7P51665 324 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 ADORA2A-AS1P86434 159 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 SORDQ00796 357 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 TBC1D28Q2M2D7 210 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 HSD17B12Q53GQ0 312 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 FAM57BQ71RH2 274 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 LUZP2Q86TE4 346 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 SLC30A7Q8NEW0 376 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 NDNFQ8TB73 568 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 SSC4DQ8WTU2 575 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 PPP1R14AQ96A00 147 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 TMEM106AQ96A25 262 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 SGK3Q96BR1 496 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 PGAM5Q96HS1 289 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR14A2Q96R54 314 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 KCNS3Q9BQ31 491 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 SNTG1Q9NSN8 517 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 DHDHQ9UQ10 334 aa12.36□□□□□ -0.43
SHMT1P1-201ENST00000419974 INTS1Q8N201 2190 aaKnown RBP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 A0A1B0GVI7 797 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 C5orf49A4QMS7 147 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 EEF1E1-BLOC1S5C9J1V9 151 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 EEF1E1O43324 174 aaKnown RBP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 DHRS3O75911 302 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZNF182P17025 639 aaPredicted RBP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 MYL9P24844 172 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 CALRP27797 417 aaKnown RBP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 SDC2P34741 201 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 RPS19P39019 145 aaKnown RBP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 SLC6A9P48067 706 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 LSM3P62310 102 aaKnown RBP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 FAM27E3Q08E93 113 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 INSL4Q14641 139 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR8B8Q15620 311 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 DGUOKQ16854 277 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 SNAI3Q3KNW1 292 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms