RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TNFRSF13BO14836 293 aaPredicted RBP12.3□□□□□ -0.44
RPS28-201ENST00000417088 IDH3BO43837 385 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 PTBP3O95758 552 aaKnown RBP12.3□□□□□ -0.44
RPS28-201ENST00000417088 HLA-DQA2P01906 255 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 SFTPBP07988 381 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 ANOS1P23352 680 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 NOS3P29474 1203 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 CFHR2P36980 270 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 GSSP48637 474 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 NPY4RP50391 375 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 SPIBQ01892 262 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 SRSF4Q08170 494 aaKnown RBP12.3□□□□□ -0.44
RPS28-201ENST00000417088 SNAI3Q3KNW1 292 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 PDLIM3Q53GG5 364 aaPredicted RBP12.3□□□□□ -0.44
RPS28-201ENST00000417088 SLC35F1Q5T1Q4 408 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 SFRP4Q6FHJ7 346 aaPredicted RBP12.3□□□□□ -0.44
RPS28-201ENST00000417088 FIP1L1Q6UN15 594 aaKnown RBP12.3□□□□□ -0.44
RPS28-201ENST00000417088 KIR3DL3Q8N743 410 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 RNF148Q8N7C7 305 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 ZNF799Q96GE5 643 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 PYURFQ96I23 114 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 TECTBQ96PL2 329 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 CHIAQ9BZP6 476 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 SLC22A4Q9H015 551 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 MMADHCQ9H3L0 296 aaPredicted RBP12.3□□□□□ -0.44
RPS28-201ENST00000417088 GORASP2Q9H8Y8 452 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 MARCH7Q9H992 704 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 FN3KRPQ9HA64 309 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 SPAG4Q9NPE6 437 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 ZNF446Q9NWS9 450 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 ADA2Q9NZK5 511 aa12.3□□□□□ -0.44
RPS28-201ENST00000417088 C5orf63A6NC05 138 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 ZNF879B4DU55 563 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 P2RY10O00398 339 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 OR10H3O60404 316 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 GMDSO60547 372 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 GMNNO75496 209 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 KNG1P01042 644 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 CRYBA1P05813 215 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 LIPFP07098 398 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 MELTFP08582 738 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 MMP9P14780 707 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 RAG2P55895 527 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 RELBQ01201 579 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 ZNF92Q03936 586 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 ZNF362Q5T0B9 420 aaPredicted RBP12.29□□□□□ -0.44
RPS28-201ENST00000417088 CD276Q5ZPR3 534 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 BOLLQ8N9W6 283 aaKnown RBP12.29□□□□□ -0.44
RPS28-201ENST00000417088 OR2AE1Q8NHA4 323 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 WFDC12Q8WWY7 111 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 SPTSSAQ969W0 71 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 CMTM5Q96DZ9 223 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 DDOQ99489 341 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 ADAT1Q9BUB4 502 aaKnown RBP12.29□□□□□ -0.44
RPS28-201ENST00000417088 MYLK2Q9H1R3 596 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 BEX1Q9HBH7 125 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 C1RLQ9NZP8 487 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 ERVK-18Q9QC07 812 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 KCNG2Q9UJ96 466 aa12.29□□□□□ -0.44
RPS28-201ENST00000417088 NOP16Q9Y3C1 178 aaKnown RBP12.29□□□□□ -0.44
RPS28-201ENST00000417088 NOTCH1P46531 2555 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 VWFP04275 2813 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 CENPVL3A0A0U1RRI6 287 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 ADAM20O43506 726 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 TOX4O94842 621 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 NDUFA7O95182 113 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 ZNF823P16415 610 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 OTX1P32242 354 aaPredicted RBP12.28□□□□□ -0.44
RPS28-201ENST00000417088 PYCR1P32322 319 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 RPS27P42677 84 aaKnown RBP12.28□□□□□ -0.44
RPS28-201ENST00000417088 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.28□□□□□ -0.44
RPS28-201ENST00000417088 KCNJ8Q15842 424 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 ZNF620Q6ZNG0 422 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 TMEM86BQ8N661 226 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 PLPP7Q8NBV4 271 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 OR4F5Q8NH21 305 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 GNPDA2Q8TDQ7 276 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 ZNRF4Q8WWF5 429 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 FAM71F1Q96KD3 344 aaPredicted RBP12.28□□□□□ -0.44
RPS28-201ENST00000417088 WDFY2Q96P53 400 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 RASSF4Q9H2L5 321 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 SMURF1Q9HCE7 757 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 C1orf123Q9NWV4 160 aa12.28□□□□□ -0.44
RPS28-201ENST00000417088 PDP1Q9P0J1 537 aaPredicted RBP12.28□□□□□ -0.44
RPS28-201ENST00000417088 GGT3PA6NGU5 568 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 TVP23AA6NH52 213 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 NDUFA2O43678 99 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 FCN3O75636 299 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 PSKH1P11801 424 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 PRDX6P30041 224 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 RRM2P31350 389 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 IFNGR2P38484 337 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 TSPAN31Q12999 210 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 OR8B8Q15620 311 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 OCLNQ16625 522 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 GLYATL3Q5SZD4 288 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 OLFML2AQ68BL7 652 aa12.27□□□□□ -0.45
RPS28-201ENST00000417088 LYPD4Q6UWN0 246 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms