RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ZNRF4Q8WWF5 429 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 CCT8L2Q96SF2 557 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 DGCR6LQ9BY27 220 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 REEP1Q9H902 201 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 ESM1Q9NQ30 184 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 CD300LBA8K4G0 201 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 PPIAL4GP0DN37 164 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 RPS27P42677 84 aaKnown RBP14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 ENTPD1P49961 510 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 BLVRAP53004 296 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 SLC25A1P53007 311 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 UBA52P62987 128 aaKnown RBP14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 TAF13Q15543 124 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 OR8G1Q15617 311 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 PCK2Q16822 640 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 TUSC1Q2TAM9 212 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 FAM201AQ5SY85 155 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 NLRC3Q7RTR2 1065 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 DCXRQ7Z4W1 244 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 OR2T33Q8NG76 320 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 OR8B3Q8NGG8 313 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 OR9Q1Q8NGQ5 310 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 RAB40AQ8WXH6 277 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 OR8B2Q96RD0 313 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 ZNF69Q9UC07 566 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 SAMHD1Q9Y3Z3 626 aaKnown RBP14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 COMMD3-BMI1R4GMX3 469 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 ANK2Q01484 3957 aa14.72□□□□□ -0.05
PDLIM2-208ENST00000416159 GGT3PA6NGU5 568 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 GMDSO60547 372 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 IFNGP01579 166 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 CALB2P22676 271 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 CD80P33681 288 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 MS4A2Q01362 244 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 PAX2Q02962 417 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 CRMP1Q14194 572 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 GK3PQ14409 553 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 SNAI3Q3KNW1 292 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 KLF17Q5JT82 389 aaPredicted RBP14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 TEX30Q5JUR7 227 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 LYPD4Q6UWN0 246 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 DCDC5Q6ZRR9 648 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 DOK3Q7L591 496 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 SIGLECL1Q8N7X8 197 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 C3orf56Q8N813 242 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 ZNF511Q8NB15 262 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 OR4Q3Q8NH05 313 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 KCNJ15Q99712 375 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 COPS4Q9BT78 406 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 NMNAT2Q9BZQ4 307 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 CENPMQ9NSP4 180 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 U3KQV3 271 aa14.71□□□□□ -0.05
PDLIM2-208ENST00000416159 IGHV2-70DA0A0C4DH43 119 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 ZNF593O00488 134 aaPredicted RBP14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 FAM20BO75063 409 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 SPARCP09486 303 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 SPI1P17947 270 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 CA6P23280 308 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 PITPNBP48739 271 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 PRKXP51817 358 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 ZNF92Q03936 586 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 PRAMEF6Q5VXH4 476 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 SPERTQ8NA61 448 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 PLPP7Q8NBV4 271 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 OR2AE1Q8NHA4 323 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 SLAMF6Q96DU3 332 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 OPA3Q9H6K4 179 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 FN3KRPQ9HA64 309 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 UFSP2Q9NUQ7 469 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 ARMC1Q9NVT9 282 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 VNN3Q9NY84 501 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 MRPL15Q9P015 296 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 RNF7Q9UBF6 113 aa14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 PRPF19Q9UMS4 504 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-208ENST00000416159 KIR2DS1A0A191URI9 304 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 RIIAD1A6NNX1 92 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 ZNF878C9JN71 531 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 SOX14O95416 240 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 GYPBP06028 91 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 RAP2AP10114 183 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 PSKH1P11801 424 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 ZNF3P17036 446 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 SLC15A1P46059 708 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 MZT1Q08AG7 82 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 GLYATL3Q5SZD4 288 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 CD300LDQ6UXZ3 194 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 CCDC197Q8NCU1 140 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 OR10G2Q8NGC3 310 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 ZMYND19Q96E35 227 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 LRGUKQ96M69 825 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 ADAT1Q9BUB4 502 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 MS4A7Q9GZW8 240 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 ZMAT3Q9HA38 289 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 CLN8Q9UBY8 286 aa14.69□□□□□ -0.06
PDLIM2-208ENST00000416159 PHYHO14832 338 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 XRCC2O43543 280 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 PTBP3O95758 552 aaKnown RBP14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 PRTN3P24158 256 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 GRB2P62993 217 aaKnown RBP14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 MPPED2Q15777 294 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms