RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 R4GMQ9 66 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 TCRBV5S2A0A599 114 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 TSPAN12O95859 305 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 CT45A6P0DMU7 189 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 CT45A5P0DMU8 189 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 CT45A7P0DMV0 189 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 CT45A8P0DMV1 189 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 CT45A9P0DMV2 189 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 PLA1AQ53H76 456 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 CT45A2Q5DJT8 189 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 CT45A1Q5HYN5 189 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 PTOV1Q86YD1 416 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 CT45A3Q8NHU0 189 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 FAM96BQ9Y3D0 163 aa9.6□□□□□ -0.87
COL12A1-203ENST00000416123 EPHA2P29317 976 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 S100A7P31151 101 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 PLPP5Q8NEB5 264 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 CMTM2Q8TAZ6 248 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 CA5BP1Q8WTZ4 195 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 SLC35B4Q969S0 331 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 FYTTD1Q96QD9 318 aaKnown RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 EXOSC3Q9NQT5 275 aaKnown RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 FAHP16930 419 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 UBE2MP61081 183 aaKnown RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 RPS16P62249 146 aaKnown RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 ST8SIA4Q92187 359 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 TUBG2Q9NRH3 451 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 GPR37O15354 613 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 CDC14BO60729 498 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 SPINK2P20155 84 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 DRD3P35462 400 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 ISL1P61371 349 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 PWWP2BQ6NUJ5 590 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 ZFP82Q8N141 532 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 TP53BP1Q12888 1972 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 GREB1Q4ZG55 1949 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 TEX51A0A1B0GUA7 166 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 BMP5P22003 454 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 OPCMLQ14982 345 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 FCN2Q15485 313 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 SPANXN5Q5MJ07 72 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 TMEM104Q8NE00 496 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 RBFOX1Q9NWB1 397 aaKnown RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 HRH1P35367 487 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 RAB13P51153 203 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 IL11RAQ14626 422 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 ELFN2Q5R3F8 820 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 KCNIP4Q6PIL6 250 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 SLC25A26Q70HW3 274 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 CISD2Q8N5K1 135 aaKnown RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 HSD17B11Q8NBQ5 300 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 OR52H1Q8NGJ2 320 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 MRPS24Q96EL2 167 aaKnown RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 FAM173AQ9BQD7 235 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 CHST6Q9GZX3 395 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 IAPPP10997 89 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 DGCR2P98153 550 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF816Q0VGE8 651 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 RTL8BQ17RB0 113 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 FAM27D1Q5T7N8 215 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 SYT6Q5T7P8 510 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 IER2Q9BTL4 223 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 PRDM7Q9NQW5 492 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 CBR1P16152 277 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 GP2P55259 537 aaKnown RBP9.59□□□□□ -0.87
COL12A1-203ENST00000416123 ARL16Q0P5N6 197 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 SHBQ15464 509 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 BHLHA9Q7RTU4 235 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 GAB3Q8WWW8 586 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 C20orf24Q9BUV8 137 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 BOLA1Q9Y3E2 137 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 SCN8AQ9UQD0 1980 aa9.59□□□□□ -0.87
COL12A1-203ENST00000416123 A0A087WUJ7 227 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 A0A087WZY1 265 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 PCBP3P57721 371 aaKnown RBP9.58□□□□□ -0.88
COL12A1-203ENST00000416123 ARV1Q9H2C2 271 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 B3GALT5Q9Y2C3 310 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 HDGFL3Q9Y3E1 203 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 CDC20BQ86Y33 519 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 UBALD1Q8TB05 177 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 OCIAD1Q9NX40 245 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 CSAG2Q9Y5P2 127 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 TET1Q8NFU7 2136 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
COL12A1-203ENST00000416123 LYZL6O75951 148 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 HLA-DOBP13765 273 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 OR4D9Q8NGE8 314 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 PSD2Q9BQI7 771 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 IGHV1OR21-1A0A087WYE8 117 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 RHNO1Q9BSD3 238 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 A4GNTQ9UNA3 340 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 PCYT1BQ9Y5K3 369 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-203ENST00000416123 SULT1C2O00338 296 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 HOXD12P35452 270 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 SRPXP78539 464 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 SLC17A1Q14916 467 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 LIMS2Q7Z4I7 341 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 SLC38A9Q8NBW4 561 aa9.58□□□□□ -0.88
COL12A1-203ENST00000416123 PRR7Q8TB68 274 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms