RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 FGF16O43320 207 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 ZNF208O43345 1280 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 IFNA6P05013 189 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 DCNP07585 359 aaKnown RBP8.71□□□□□ -1.01
CD44-206ENST00000415148 HLA-DOBP13765 273 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 PSMB6P28072 239 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 PPM1FP49593 454 aaPredicted RBP8.71□□□□□ -1.01
CD44-206ENST00000415148 C17orf67Q0P5P2 114 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 UNC119Q13432 240 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 SHHQ15465 462 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 KCTD9Q7L273 389 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 CHST4Q8NCG5 386 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 PLPP5Q8NEB5 264 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 OR4A4PQ8NGN8 299 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 OR10R2Q8NGX6 335 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 PAQR8Q8TEZ7 354 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 C12orf57Q99622 126 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 CMSS1Q9BQ75 279 aaKnown RBP8.71□□□□□ -1.01
CD44-206ENST00000415148 SELENOIQ9C0D9 397 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 CHRDQ9H2X0 955 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 ANAPC10Q9UM13 185 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 A0A0B4J2A0 478 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 OR2AT4A6NND4 320 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 TMEM14DPA8MWL7 114 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 F5H0A9 414 aaPredicted RBP8.71□□□□□ -1.02
CD44-206ENST00000415148 TTRP02766 147 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 GSTP1P09211 210 aaKnown RBP8.71□□□□□ -1.02
CD44-206ENST00000415148 VSIG8P0DPA2 414 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 EN2P19622 333 aaPredicted RBP8.71□□□□□ -1.02
CD44-206ENST00000415148 KCNJ3P48549 501 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 B2MP61769 119 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 DLX2Q07687 328 aaPredicted RBP8.71□□□□□ -1.02
CD44-206ENST00000415148 ZNF528Q3MIS6 628 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 ACTBL2Q562R1 376 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 TMEM200AQ86VY9 491 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 HOGA1Q86XE5 327 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 KDM8Q8N371 416 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 OR2I1PQ8NGU4 316 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 NUDCD2Q8WVJ2 157 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 DDIT4LQ96D03 193 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 PBOV1Q9GZY1 135 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 MOB1AQ9H8S9 216 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 CHST11Q9NPF2 352 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 CENPMQ9NSP4 180 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 TMEM100Q9NV29 134 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 COA4Q9NYJ1 87 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 KLHL13Q9P2N7 655 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 SHPKQ9UHJ6 478 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 KCNK7Q9Y2U2 307 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 FAM96BQ9Y3D0 163 aa8.71□□□□□ -1.02
CD44-206ENST00000415148 PHF3Q92576 2039 aaKnown RBP8.7□□□□□ -1.02
CD44-206ENST00000415148 TEX13DA0A0J9YY54 714 aaPredicted RBP8.7□□□□□ -1.02
CD44-206ENST00000415148 CEACAM18A8MTB9 384 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 SYT7O43581 403 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 CRHP06850 196 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 PGAM2P15259 253 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 CD38P28907 300 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 HRH1P35367 487 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 ARL4DP49703 201 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 EFNA3P52797 238 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 CLDN6P56747 220 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 HSF1Q00613 529 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 C14orf28Q4W4Y0 310 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 LINC00346Q8IVM7 164 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 ARMC10Q8N2F6 343 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 OR10H5Q8NGA6 315 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 OR5AP2Q8NGF4 316 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 OR52N4Q8NGI2 321 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 SLAMF6Q96DU3 332 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 PIK3IP1Q96FE7 263 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 SCGB3A2Q96PL1 93 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 DHCR7Q9UBM7 475 aaKnown RBP8.7□□□□□ -1.02
CD44-206ENST00000415148 B3GALT5Q9Y2C3 310 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 MYO9BQ13459 2157 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 SEC16AO15027 2179 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 A0A1W2PR77 199 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 MSGN1A6NI15 193 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 SHISA7A6NL88 538 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 RHPN2P1A8MT19 583 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 H0YIZ8 118 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 ZNF217O75362 1048 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 TPT1P13693 172 aaKnown RBP8.7□□□□□ -1.02
CD44-206ENST00000415148 CD27P26842 260 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 GNALP38405 381 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 CSNK1EP49674 416 aaKnown RBP8.7□□□□□ -1.02
CD44-206ENST00000415148 TLE3Q04726 772 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 MST1LQ2TV78 715 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 TMEM128Q5BJH2 165 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 VAX1Q5SQQ9 334 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 THEM4Q5T1C6 240 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 PTCRAQ6ISU1 281 aaPredicted RBP8.7□□□□□ -1.02
CD44-206ENST00000415148 HAGHLQ6PII5 290 aaPredicted RBP8.7□□□□□ -1.02
CD44-206ENST00000415148 D2HGDHQ8N465 521 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 ARRDC1Q8N5I2 433 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 SLC30A7Q8NEW0 376 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 OR4K17Q8NGC6 315 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 TERB2Q8NHR7 220 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 ZNF775Q96BV0 537 aaPredicted RBP8.7□□□□□ -1.02
CD44-206ENST00000415148 CPNE2Q96FN4 548 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms