RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 STK17BO94768 372 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 F12P00748 615 aaPredicted RBP8.73□□□□□ -1.01
SS18-203ENST00000415083 DCNP07585 359 aaKnown RBP8.73□□□□□ -1.01
SS18-203ENST00000415083 SLC2A1P11166 492 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 RPS2P15880 293 aaKnown RBP8.73□□□□□ -1.01
SS18-203ENST00000415083 DNASE1L1P49184 302 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 BLKP51451 505 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 DCAF7P61962 342 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 HSF1Q00613 529 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 SDK1Q7Z5N4 2213 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 NAA40Q86UY6 237 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 HOGA1Q86XE5 327 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 OR1M1Q8NGA1 313 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 OR13C9Q8NGT0 318 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 WDR77Q9BQA1 342 aaPredicted RBP8.73□□□□□ -1.01
SS18-203ENST00000415083 SELENOIQ9C0D9 397 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 ACKR4Q9NPB9 350 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 CENPMQ9NSP4 180 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 RAB22AQ9UL26 194 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 PCDHB10Q9UN67 800 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 B3GALT1Q9Y5Z6 326 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 A0A0A6YYH2 397 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 A0A0D9SG52 128 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 A6NJ64 397 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 FAM25EA8MYX2 175 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 H2AFB1P0C5Y9 115 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 CRABP1P29762 137 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 DLSTP36957 453 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 C14orf28Q4W4Y0 310 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 PABPC1L2AQ5JQF8 200 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 LCN10Q6JVE6 187 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 ZNF584Q8IVC4 421 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 OR51E1Q8TCB6 317 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 C5orf34Q96MH7 638 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 RTBDNQ9BSG5 229 aaPredicted RBP8.73□□□□□ -1.01
SS18-203ENST00000415083 SLCO5A1Q9H2Y9 848 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 SEMA5BQ9P283 1151 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 PLEKHA6Q9Y2H5 1048 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 TRBV6-7A0A0A0MS04 114 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 ETV2O00321 342 aaPredicted RBP8.73□□□□□ -1.01
SS18-203ENST00000415083 ABCD4O14678 606 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 ADAP1O75689 374 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 OR2F2O95006 317 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 HSD11B1P28845 292 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 CD38P28907 300 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 STARP49675 285 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 GMFBP60983 142 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 HSD11B2P80365 405 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 MC2RQ01718 297 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 OR2F1Q13607 317 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 ZNF169Q14929 603 aaPredicted RBP8.73□□□□□ -1.01
SS18-203ENST00000415083 ACOT7LQ6ZUV0 252 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 TMEM200AQ86VY9 491 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 PNLDC1Q8NA58 520 aaKnown RBP8.73□□□□□ -1.01
SS18-203ENST00000415083 CCDC107Q8WV48 283 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 FANCFQ9NPI8 374 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 TMEM100Q9NV29 134 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 CKLFQ9UBR5 152 aa8.73□□□□□ -1.01
SS18-203ENST00000415083 GPN3Q9UHW5 284 aaPredicted RBP8.73□□□□□ -1.01
SS18-203ENST00000415083 ARPC4-TTLL3A0A0A6YYG9 625 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 ANKUB1A6NFN9 424 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 LMO7DNF2Z398 122 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 H3BML4 177 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 NUDT21O43809 227 aaKnown RBP8.72□□□□□ -1.01
SS18-203ENST00000415083 AHSA1O95433 338 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 CRHP06850 196 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 CD79AP11912 226 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 PGAM2P15259 253 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 PI3P19957 117 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 FBLP22087 321 aaKnown RBP8.72□□□□□ -1.01
SS18-203ENST00000415083 BIDP55957 195 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 SPEM2Q0P670 501 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 ANKRD55Q3KP44 614 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 PLEKHN1Q494U1 663 aaPredicted RBP8.72□□□□□ -1.01
SS18-203ENST00000415083 AADACL3Q5VUY0 350 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 ZNF574Q6ZN55 896 aaPredicted RBP8.72□□□□□ -1.01
SS18-203ENST00000415083 H1FNTQ75WM6 255 aaPredicted RBP8.72□□□□□ -1.01
SS18-203ENST00000415083 LDLRAD3Q86YD5 345 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 PUSL1Q8N0Z8 303 aaKnown RBP8.72□□□□□ -1.01
SS18-203ENST00000415083 SLC25A45Q8N413 288 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 ZDHHC22Q8N966 263 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 TMEM185AQ8NFB2 350 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 MFSD8Q8NHS3 518 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 PIK3IP1Q96FE7 263 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 LYZL4Q96KX0 146 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 DNTTIP1Q9H147 329 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 GAREM1Q9H706 876 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 SERINC1Q9NRX5 453 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 OR5AC2Q9NZP5 309 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 ZNF581Q9P0T4 197 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 EEF1E1-BLOC1S5C9J1V9 151 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 SNAPC5O75971 98 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 CD2P06729 351 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 AKR1C4P17516 323 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 SERPINF1P36955 418 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 IL15RAQ13261 267 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 RSPO1Q2MKA7 263 aaPredicted RBP8.72□□□□□ -1.01
SS18-203ENST00000415083 C10orf91Q5T1B1 145 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 ANGPTL5Q86XS5 388 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms