RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 EID2Q8N6I1 236 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 PLPPR1Q8TBJ4 325 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 HTR3CQ8WXA8 447 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 RASL10AQ92737 203 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 DLX4Q92988 240 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 CELF6Q96J87 481 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 SLC45A3Q96JT2 553 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CENPHQ9H3R5 247 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 DHX35Q9H5Z1 703 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 DMAP1Q9NPF5 467 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 ZNF71Q9NQZ8 489 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 TMEM181Q9P2C4 612 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CCL26Q9Y258 94 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 EIF3LQ9Y262 564 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 PDZD2O15018 2839 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CABIN1Q9Y6J0 2220 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 MYO9AB2RTY4 2548 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TRAV9-2A0A087WT02 112 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 KBTBD11-OT1A0A1B0GTJ5 212 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 FAM92AA1XBS5 289 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 A6NIZ1 184 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 H3BQF6 201 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 H7C0C1 242 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 GFYI3L273 518 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TOX3O15405 576 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 PROP1O75360 226 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CEACAM4O75871 244 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 PTTG1O95997 202 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 ZDHHC11BP0C7U3 371 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 PATE4P0C8F1 98 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 RNF224P0DH78 156 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 STOMP27105 288 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 SHMT2P34897 504 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 SPRP35270 261 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 CEACAM3P40198 252 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 NR4A2P43354 598 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 ZFP36L2P47974 494 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 RPL34P49207 117 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 LINC00205P59089 165 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 UBE2G2P60604 165 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 RAP1BP61224 184 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 ERVK-25P63136 954 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 ILF3Q12906 894 aaKnown RBP eCLIP2.08□□□□□ -2.08
MCF2-204ENST00000414978 COTL1Q14019 142 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 GRB7Q14451 532 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CYTH1Q15438 398 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TNXAQ16473 311 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 NDUFAF6Q330K2 333 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 KRTAP15-1Q3LI76 137 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CEP85LQ5SZL2 805 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 OR2G6Q5TZ20 316 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 C9orf135Q5VTT2 229 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 C1orf189Q5VU69 101 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 STRADAQ7RTN6 431 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 THOC6Q86W42 341 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 APRG1Q8IVJ8 170 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 DEFB106AQ8N104 65 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 MS4A15Q8N5U1 240 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TPRX1Q8N7U7 411 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 OR4A4PQ8NGN8 299 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 GATAD1Q8WUU5 269 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 LRRC58Q96CX6 371 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 WDR34Q96EX3 536 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 C18orf12Q96KH6 178 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 ZIM3Q96PE6 472 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 PEBP4Q96S96 227 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 SNRNP25Q9BV90 132 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 ULBP1Q9BZM6 244 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 PIGUQ9H490 435 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 GPATCH2LQ9NWQ4 482 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CLN8Q9UBY8 286 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 DOCK9Q9BZ29 2069 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 F5P12259 2224 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TRBV9A0A0B4J1U6 114 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 FABP12A6NFH5 140 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TRDCB7Z8K6 153 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 APOC4-APOC2K7ER74 178 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 COCHO43405 550 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 FGF17O60258 216 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CLDN9O95484 217 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 APOC2P02655 101 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 ZNF23P17027 643 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 RRM2P31350 389 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 LCN2P80188 198 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 DPTQ07507 201 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 GANABQ14697 944 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 BSPRYQ5W0U4 402 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 AWAT2Q6E213 333 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CROCCP2Q86T23 111 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TGIF2LYQ8IUE0 185 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 IQCKQ8N0W5 287 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 SPAG16Q8N0X2 631 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 OR2G2Q8NGZ5 317 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 FAM76AQ8TAV0 307 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TOMM40LQ969M1 308 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 RNF157Q96PX1 679 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 NODALQ96S42 347 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CNN2Q99439 309 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 UBXN6Q9BZV1 441 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 SLC38A1Q9H2H9 487 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms