RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ZNF32P17041 273 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 HOXA5P20719 270 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 CCNOP22674 350 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 SLC6A6P31641 620 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ARR3P36575 388 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 CDKN2AP42771 156 aaKnown RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 GSSP48637 474 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ATP5J2P56134 94 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 SMIM11AP58511 58 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ERVS71-1P61550 626 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 HOXA4Q00056 320 aaPredicted RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 TRAP1Q12931 704 aaKnown RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 TSPAN31Q12999 210 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 IRF3Q14653 427 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 KPNB1Q14974 876 aaKnown RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 MEP1BQ16820 701 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 RFX4Q33E94 735 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ALKBH6Q3KRA9 238 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 SLC36A2Q495M3 483 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 C10orf128Q5T292 105 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 C1orf94Q6P1W5 598 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 TMEM53Q6P2H8 277 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 LEG1Q6P5S2 330 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 MOB3CQ70IA8 216 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 PRSS45Q7RTY3 260 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 FAM122BQ7Z309 247 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 HDDC2Q7Z4H3 204 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 YTHDF3Q7Z739 585 aaKnown RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 KLBQ86Z14 1044 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 AQP12AQ8IXF9 295 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 FBXL14Q8N1E6 418 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 MUC15Q8N387 334 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 PAQR4Q8N4S7 273 aaPredicted RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 IQCF1Q8N6M8 205 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ARIH2OSQ8N7S6 290 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 CYB561A3Q8NBI2 242 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 MAPK1IP1LQ8NDC0 245 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ICA1LQ8NDH6 482 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 SDR9C7Q8NEX9 313 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 OR10G2Q8NGC3 310 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 OR8D4Q8NGM9 314 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 OR4K13Q8NH42 304 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 GNPDA2Q8TDQ7 276 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 IGFBPL1Q8WX77 278 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 PIGTQ969N2 578 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 NABP1Q96AH0 204 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 DAZAP1Q96EP5 407 aaKnown RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 ZNF75AQ96N20 296 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 RBP7Q96R05 134 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 NMNAT3Q96T66 252 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 TRAF4Q9BUZ4 470 aaPredicted RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 ALG12Q9BV10 488 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ZNF416Q9BWM5 594 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 CACNG6Q9BXT2 260 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 NUAK2Q9H093 628 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 SCPEP1Q9HB40 452 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 CCNB1IP1Q9NPC3 277 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ARMC1Q9NVT9 282 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 KIAA1456Q9P272 454 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 CRNNQ9UBG3 495 aaPredicted RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 MGAT4BQ9UQ53 548 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 NF1P21359 2839 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 TCRBV3S1A0A5B6 114 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 HTR3EA5X5Y0 456 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 A6NIZ1 184 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 CENPBD1B2RD01 187 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 H3BN98 237 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 DCTN6O00399 190 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 SSX4O60224 188 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 FKBP6O75344 327 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 E2F6O75461 281 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 KRT36O76013 467 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 OR2C1O95371 312 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 GYPBP06028 91 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 MMP7P09237 267 aaPredicted RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 OR4A8P0C604 315 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 PRKACGP22612 351 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 POU1F1P28069 291 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 PYCR1P32322 319 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 IFNGR2P38484 337 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 RAP1BP61224 184 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 RAP1AP62834 184 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 MRPS34P82930 218 aaKnown RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 PSG4Q00888 419 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 GALK2Q01415 458 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 HSF2Q03933 536 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 GLO1Q04760 184 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 ENDOGQ14249 297 aaKnown RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 MAD2L1BPQ15013 274 aaPredicted RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 TAF11Q15544 211 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 ADIPOQQ15848 244 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 MICAQ29983 383 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 ANKDD1AQ495B1 522 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 SLC36A3Q495N2 470 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 AWAT1Q58HT5 328 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 PABPC1L2AQ5JQF8 200 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 SPATA46Q5T0L3 261 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 THEM4Q5T1C6 240 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 C1QTNF12Q5T7M4 302 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 C1orf146Q5VVC0 180 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms