RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SLC15A1P46059 708 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 GRB2P62993 217 aaKnown RBP15.92■□□□□ 0.14
TRIM56-202ENST00000412507 ZNF92Q03936 586 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 APOFQ13790 326 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 SLC35D3Q5M8T2 416 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 GLYATL3Q5SZD4 288 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 FAM120AOSQ5T036 256 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 KDM4DQ6B0I6 523 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 PYDC1Q8WXC3 89 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 ZNF665Q9H7R5 613 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 LPAR2Q9HBW0 351 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 TMEM106BQ9NUM4 274 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 TMEM100Q9NV29 134 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 PPP1R3CQ9UQK1 317 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 ISPDA4D126 451 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 B4DSR2 109 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 F5H5P2 479 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 HLA-DPB1P04440 258 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 HSD11B1P28845 292 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 EPHA2P29317 976 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 CX3CR1P49238 355 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 CR1LQ2VPA4 569 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 ZNF771Q7L3S4 317 aaPredicted RBP15.91■□□□□ 0.14
TRIM56-202ENST00000412507 PEG10Q86TG7 708 aaKnown RBP15.91■□□□□ 0.14
TRIM56-202ENST00000412507 OTOSQ8NHW6 89 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 THEM6Q8WUY1 208 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 CENPNQ96H22 339 aaPredicted RBP15.91■□□□□ 0.14
TRIM56-202ENST00000412507 MEGF10Q96KG7 1140 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 REPIN1Q9BWE0 567 aaKnown RBP15.91■□□□□ 0.14
TRIM56-202ENST00000412507 TOR3AQ9H497 397 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 DNAJC27Q9NZQ0 273 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 LPAR3Q9UBY5 353 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 NPTNQ9Y639 398 aa15.91■□□□□ 0.14
TRIM56-202ENST00000412507 IGHV3-64DA0A0J9YX35 117 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 SAC3D1A6NKF1 404 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 CD300LBA8K4G0 201 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 M0R129 80 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 TBX1O43435 398 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 PRKYO43930 277 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 ANXA2P07355 339 aaKnown RBP15.9■□□□□ 0.14
TRIM56-202ENST00000412507 LYNP07948 512 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 DVL1P1P54792 670 aaPredicted RBP15.9■□□□□ 0.14
TRIM56-202ENST00000412507 ACTR3P61158 418 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 KPNB1Q14974 876 aaKnown RBP15.9■□□□□ 0.14
TRIM56-202ENST00000412507 ZNF420Q8TAQ5 688 aaPredicted RBP15.9■□□□□ 0.14
TRIM56-202ENST00000412507 SPRYD4Q8WW59 207 aaPredicted RBP15.9■□□□□ 0.14
TRIM56-202ENST00000412507 GAL3ST1Q99999 423 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 GCM1Q9NP62 436 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 TMEFF2Q9UIK5 374 aaPredicted RBP15.9■□□□□ 0.14
TRIM56-202ENST00000412507 OAZ3Q9UMX2 235 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 ATRQ13535 2644 aa15.9■□□□□ 0.14
TRIM56-202ENST00000412507 A0A1B0GWJ7 208 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 CCDC182A6NF36 153 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 GGT3PA6NGU5 568 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 ZAR1LA6NP61 321 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 IGHV2-5P01817 119 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 H2BFMP0C1H6 154 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 FAM157CP0CG43 387 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 OPRL1P41146 370 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 SRP9P49458 86 aaKnown RBP15.89■□□□□ 0.13
TRIM56-202ENST00000412507 HCCSP53701 268 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 SLX4IPQ5VYV7 408 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 GLCCI1Q86VQ1 547 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 TCEANCQ8N8B7 351 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 ZNF454Q8N9F8 522 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 RAB39BQ96DA2 213 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 SIGLEC11Q96RL6 698 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 TEAD3Q99594 435 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 CIB1Q99828 191 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 PRRG3Q9BZD7 231 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 BRD7Q9NPI1 651 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 UBAP1Q9NZ09 502 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 KLHDC2Q9Y2U9 406 aa15.89■□□□□ 0.13
TRIM56-202ENST00000412507 XRCC2O43543 280 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 IGHV2-70P01814 119 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 APOC1P02654 83 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 MSMBP08118 114 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 MRPL3P09001 348 aaKnown RBP15.88■□□□□ 0.13
TRIM56-202ENST00000412507 SBK2P0C263 348 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 HNF1AP20823 631 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 CA6P23280 308 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 MMP16P51512 607 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 ZNF121P58317 390 aaPredicted RBP15.88■□□□□ 0.13
TRIM56-202ENST00000412507 C12orf73Q69YU5 71 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 FAM57BQ71RH2 274 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 RHOUQ7L0Q8 258 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 SLC16A9Q7RTY1 509 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 BCDIN3DQ7Z5W3 292 aaKnown RBP15.88■□□□□ 0.13
TRIM56-202ENST00000412507 MOGAT3Q86VF5 341 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.88■□□□□ 0.13
TRIM56-202ENST00000412507 OR51F2Q8NH61 342 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 TMEM186Q96B77 213 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 PKP2Q99959 881 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 HIF1ANQ9NWT6 349 aa15.88■□□□□ 0.13
TRIM56-202ENST00000412507 TMEM178BH3BS89 294 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 ALOX5APP20292 161 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 POLR2IP36954 125 aaKnown RBP15.87■□□□□ 0.13
TRIM56-202ENST00000412507 MAB21L1Q13394 359 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 OR8G1Q15617 311 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 TIGD6Q17RP2 521 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms