RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 ISLRO14498 428 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 F7P08709 466 aaPredicted RBP6.73□□□□□ -1.33
PTPN3-203ENST00000412145 CXCL12P48061 93 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 DIO1P49895 249 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 ARSDP51689 593 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 HAGHQ16775 308 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 Q3ZCU0 254 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 TRIM61Q5EBN2 209 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 NHSL2Q5HYW2 709 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 FAM71CQ8NEG0 241 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 OR5D13Q8NGL4 314 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 FAM103A1Q9BTL3 118 aaKnown RBP6.73□□□□□ -1.33
PTPN3-203ENST00000412145 TMPRSS13Q9BYE2 586 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 OR2J1Q9GZK6 312 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 PTGDR2Q9Y5Y4 395 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 IFITM5A6NNB3 132 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 PRRG2O14669 202 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 PDE6DO43924 150 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 SFTA3P0C7M3 94 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 RPL24P83731 157 aaKnown RBP6.73□□□□□ -1.33
PTPN3-203ENST00000412145 IL13RA2Q14627 380 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 RPS27LQ71UM5 84 aaKnown RBP6.73□□□□□ -1.33
PTPN3-203ENST00000412145 DCXRQ7Z4W1 244 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 PELI3Q8N2H9 469 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 NPEPL1Q8NDH3 523 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 ZNF680Q8NEM1 530 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 GAL3ST2Q9H3Q3 398 aa6.73□□□□□ -1.33
PTPN3-203ENST00000412145 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.73□□□□□ -1.33
PTPN3-203ENST00000412145 MYOM1P52179 1685 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 A0A1B0GTQ1 180 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 H0YGG7 62 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 PGA4P0DJD7 388 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 PGA5P0DJD9 388 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 ALOX5APP20292 161 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 HTR1DP28221 377 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 OR10AD1Q8NGE0 317 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 PRSS3P2Q8NHM4 247 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 RTN4IP1Q8WWV3 396 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 ZNF707Q96C28 371 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 MRPL38Q96DV4 380 aaKnown RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SEC22AQ96IW7 307 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 CRYAAP02489 173 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SCGB1A1P11684 91 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 DAPP51397 102 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 CLN3Q13286 438 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 PRAMEF20Q5VT98 475 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 VRK2Q86Y07 508 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SCCPDHQ8NBX0 429 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 C10orf35Q96D05 121 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 PIK3IP1Q96FE7 263 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 TP53RKQ96S44 253 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SMG9Q9H0W8 520 aaKnown RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 PROCRQ9UNN8 238 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 N4BP2Q86UW6 1770 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 ARFGEF2Q9Y6D5 1785 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 HMSDA8MTL9 139 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SP1P08047 785 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 RELBQ01201 579 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 C1orf174Q8IYL3 243 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 TTC9Q92623 222 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 GMLQ99445 158 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 LPAR3Q9UBY5 353 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 NAT8BQ9UHF3 227 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SNX11Q9Y5W9 270 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 P2RY10O00398 339 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 WDR1O75083 606 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SIX6O95475 246 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 OR5AL1P0C617 328 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 LIPCP11150 499 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 ANKRD55Q3KP44 614 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 LAIR1Q6GTX8 287 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SLC36A1Q7Z2H8 476 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 OXGR1Q96P68 337 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 NMNAT3Q96T66 252 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 RSG1Q9BU20 258 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 TMEM70Q9BUB7 260 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SHPRHQ149N8 1683 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 ACTL6AO96019 429 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SLC6A1P30531 599 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 JMJD6Q6NYC1 403 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 UBAC2Q8NBM4 344 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 LHX3Q9UBR4 397 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 ZNF835Q9Y2P0 537 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 RPLP1P05386 114 aaKnown RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 METAP1P53582 386 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SPANXN5Q5MJ07 72 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 TMEM268Q5VZI3 342 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 C12orf54Q6X4T0 127 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 LRP11Q86VZ4 500 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 MYOZ1Q9NP98 299 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 AP5S1Q9NUS5 200 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 LANCL1O43813 399 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 SLCO2B1O94956 709 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 ZNF26P17031 533 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 RPL30P62888 115 aaKnown RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 DUSP8Q13202 625 aa6.72□□□□□ -1.33
PTPN3-203ENST00000412145 LGALSLQ3ZCW2 172 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-203ENST00000412145 MIDNQ504T8 468 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms