RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 DOK4Q8TEW6 326 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 RANBP9Q96S59 729 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 DERL2Q9GZP9 239 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 VCX3BQ9H321 246 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 DSN1Q9H410 356 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 HEXA-AS1Q9H8Q6 139 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 PRG3Q9Y2Y8 225 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 TBL2Q9Y4P3 447 aaKnown RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 POLR3HQ9Y535 204 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 UBIAD1Q9Y5Z9 338 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 A0A1B0GX12 115 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ISPDA4D126 451 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 OR6C70A6NIJ9 312 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 SYCE1LA8MT33 242 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 J3QLI3 93 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 GPR171O14626 319 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 MPZL2O60487 215 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 CACNA1FO60840 1977 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 SHOX2O60902 331 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF253O75346 499 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 RDH16O75452 317 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 KBTBD11O94819 623 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 SNAPINO95295 136 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 C6orf47O95873 294 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ORM1P02763 201 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 OR5AL1P0C617 328 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 GKN3PP0CG01 181 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 CCDC166P0CW27 439 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 OR5H8P0DN80 308 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ATF6P18850 670 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 F2RP25116 425 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 HRH1P35367 487 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 AQP5P55064 265 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 RHOAP61586 193 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 RPS21P63220 83 aaKnown RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 RUNX3Q13761 415 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 FZD2Q14332 565 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 CAPRIN1Q14444 709 aaKnown RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 TRAM1Q15629 374 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 SLC36A2Q495M3 483 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 COX19Q49B96 90 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 FAM182AQ5T1J6 154 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 NIPAL1Q6NVV3 410 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF589Q86UQ0 364 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 P2RY8Q86VZ1 359 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 OR8G5Q8NG78 346 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 GEMIN6Q8WXD5 167 aaKnown RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 KIAA0232Q92628 1395 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ESR2Q92731 530 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 C18orf12Q96KH6 178 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 RNF145Q96MT1 663 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 VAT1Q99536 393 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 MAP3K5Q99683 1374 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 KIR2DL4Q99706 377 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 C20orf144Q9BQM9 153 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 LRRC61Q9BV99 259 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 POLR2J2Q9GZM3 115 aaKnown RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 POLR2J3Q9H1A7 115 aaKnown RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 SRMSQ9H3Y6 488 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF442Q9H7R0 627 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 RDH14Q9HBH5 336 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 CLCF1Q9UBD9 225 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 WIF1Q9Y5W5 379 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 SLC25A15Q9Y619 301 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 MTCL1Q9Y4B5 1905 aaKnown RBP3.43□□□□□ -1.86
BRCA1-204ENST00000412061 CAMTA1Q9Y6Y1 1673 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 MAP3K15Q6ZN16 1313 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 IGLV1-36A0A0B4J1U3 117 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 TRAV39A0A0B4J263 110 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 SLC5A10A0PJK1 596 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 C9J4A7 227 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 FTCDNL1E5RQL4 147 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF593O00488 134 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-204ENST00000412061 CDIPTO14735 213 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ATP6V1G2O95670 118 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 RAB36O95755 333 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 HPNP05981 417 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 RETP07949 1114 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 CSF3P09919 207 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 THRAP10827 490 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF7P17097 686 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-204ENST00000412061 TUFMP49411 452 aaKnown RBP3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ACTBP60709 375 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 RPL10AP62906 217 aaKnown RBP3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ACTG1P63261 375 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 TRIP13Q15645 432 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-204ENST00000412061 PRR4Q16378 134 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 TMEM249Q2WGJ8 235 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 C14orf177Q52M58 125 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 HBMQ6B0K9 141 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 THOC7Q6I9Y2 204 aaKnown RBP3.43□□□□□ -1.86
BRCA1-204ENST00000412061 C2orf66Q6UXQ4 117 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 BAIAP2L2Q6UXY1 529 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF497Q6ZNH5 498 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 OAFQ86UD1 273 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 SLC30A8Q8IWU4 369 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ENTHD1Q8IYW4 607 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF786Q8N393 782 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 C2orf73Q8N5S3 287 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms