RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 CMYA5Q8N3K9 4069 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 IGHV1-69DA0A0B4J2H0 117 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 UNC119BA6NIH7 251 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 TIMM23O14925 209 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 PPP1R3DO95685 299 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 IGHV1-69P01742 117 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 H1F0P07305 194 aaKnown RBP7.54□□□□□ -1.2
MRPL48-204ENST00000411840 MMP9P14780 707 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 DBPQ10586 325 aaPredicted RBP7.54□□□□□ -1.2
MRPL48-204ENST00000411840 TRAP1Q12931 704 aaKnown RBP7.54□□□□□ -1.2
MRPL48-204ENST00000411840 FGD3Q5JSP0 725 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 METTL11BQ5VVY1 283 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 ASPHD2Q6ICH7 369 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 SLC18B1Q6NT16 456 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 SMARCD3Q6STE5 483 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 CFAP77Q6ZQR2 320 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 ARPINQ7Z6K5 226 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 LINC00346Q8IVM7 164 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 PNLDC1Q8NA58 520 aaKnown RBP7.54□□□□□ -1.2
MRPL48-204ENST00000411840 SLC26A10Q8NG04 563 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 LINC01006Q8NI28 216 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 DYRK2Q92630 601 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 LHX4Q969G2 390 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 ERMAPQ96PL5 475 aaPredicted RBP7.54□□□□□ -1.2
MRPL48-204ENST00000411840 NMNAT3Q96T66 252 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 ATF6BQ99941 703 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 HOPXQ9BPY8 73 aaPredicted RBP7.54□□□□□ -1.2
MRPL48-204ENST00000411840 RBM4BQ9BQ04 359 aaKnown RBP7.54□□□□□ -1.2
MRPL48-204ENST00000411840 FN3KRPQ9HA64 309 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 NDUFAF4Q9P032 175 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 ARMCX1Q9P291 453 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 CTSZQ9UBR2 303 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 CYB5R1Q9UHQ9 305 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 AURKCQ9UQB9 309 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 FAM32AQ9Y421 112 aaKnown RBP7.54□□□□□ -1.2
MRPL48-204ENST00000411840 RNF114Q9Y508 228 aa7.54□□□□□ -1.2
MRPL48-204ENST00000411840 TANC2Q9HCD6 1990 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 NOTCH1P46531 2555 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 TRBV4-1A0A0J9YWV2 114 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 A0A0U1RQK1 487 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 CD300LBA8K4G0 201 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 LGALS8O00214 317 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 NME4O00746 187 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 ADAM20O43506 726 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 NDUFA2O43678 99 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 GPR137BO60478 399 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 GMDSO60547 372 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 PTBP3O95758 552 aaKnown RBP7.53□□□□□ -1.2
MRPL48-204ENST00000411840 IGHV4-59P01825 116 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 NCK1P16333 377 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 GGT2P36268 569 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 IER3P46695 156 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 GSK3BP49841 420 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 SLC7A2P52569 658 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 TPTEP56180 551 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 RPL15P61313 204 aaKnown RBP7.53□□□□□ -1.2
MRPL48-204ENST00000411840 ARF6P62330 175 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 SEC23BQ15437 767 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 OR8B8Q15620 311 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 TAF9Q16594 264 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 RFX4Q33E94 735 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 SLC36A3Q495N2 470 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 CGB2Q6NT52 195 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 MRPL21Q7Z2W9 205 aaKnown RBP7.53□□□□□ -1.2
MRPL48-204ENST00000411840 HDXQ7Z353 690 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 OR2AJ1Q8NGZ0 328 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 OR52J3Q8NH60 311 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 RP9Q8TA86 221 aaKnown RBP7.53□□□□□ -1.2
MRPL48-204ENST00000411840 UBE2FQ969M7 185 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 FAM162AQ96A26 154 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 PKP2Q99959 881 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 SLC22A4Q9H015 551 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 SIRPDQ9H106 197 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 SMURF1Q9HCE7 757 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 TRIM36Q9NQ86 728 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 FGFR1OP2Q9NVK5 253 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 C1orf123Q9NWV4 160 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 NOP16Q9Y3C1 178 aaKnown RBP7.53□□□□□ -1.2
MRPL48-204ENST00000411840 CAPN7Q9Y6W3 813 aa7.53□□□□□ -1.2
MRPL48-204ENST00000411840 TRAV38-1A0A0B4J264 116 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 OR6C68A6NDL8 312 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 OOEPA6NGQ2 149 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 DVL1O14640 695 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 ARPC3O15145 178 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 SLC22A2O15244 555 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 CLPXO76031 633 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 DIRAS1O95057 198 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 RENP00797 406 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 HLA-DQA2P01906 255 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 GYPAP02724 150 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 GRPP07492 148 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 HIST1H1CP16403 213 aaKnown RBP7.52□□□□□ -1.21
MRPL48-204ENST00000411840 RHCEP18577 417 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 PROK1P58294 105 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 ZNF92Q03936 586 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 KRT72Q14CN4 511 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 C8orf82Q6P1X6 216 aaPredicted RBP7.52□□□□□ -1.21
MRPL48-204ENST00000411840 BTN2A1Q7KYR7 527 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 ZBTB46Q86UZ6 589 aa7.52□□□□□ -1.21
MRPL48-204ENST00000411840 PDZD9Q8IXQ8 264 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms