RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ORM1P02763 201 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 EIF4EP06730 217 aaKnown RBP3.72□□□□□ -1.81
LSM5-205ENST00000409952 OCM2P0CE71 109 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 CCDC166P0CW27 439 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 THRAP10827 490 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 GALR1P47211 349 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 TGM4P49221 684 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 RPS21P63220 83 aaKnown RBP3.72□□□□□ -1.81
LSM5-205ENST00000409952 PAX8Q06710 450 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 ZSCAN26Q16670 478 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 SLC36A2Q495M3 483 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 PIGGQ5H8A4 983 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 THEM4Q5T1C6 240 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 LCN12Q6JVE5 192 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 EPGNQ6UW88 154 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 MOB1BQ7L9L4 216 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 P2RY8Q86VZ1 359 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 SLC30A8Q8IWU4 369 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 Q8N377 158 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 ATPAF2Q8N5M1 289 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 NPWQ8N729 165 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 OR10J6PQ8NGY7 276 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 ZFP90Q8TF47 636 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 GEMIN6Q8WXD5 167 aaKnown RBP3.72□□□□□ -1.81
LSM5-205ENST00000409952 PPP1R14BQ96C90 147 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 CMTM5Q96DZ9 223 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 ZNF488Q96MN9 340 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 RNF145Q96MT1 663 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 SMIM14Q96QK8 99 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 OPRPNQ99935 248 aaPredicted RBP3.72□□□□□ -1.81
LSM5-205ENST00000409952 DSN1Q9H410 356 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 PRORYQ9H606 182 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 ZNF442Q9H7R0 627 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 PANK3Q9H999 370 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 SCRT2Q9NQ03 307 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 ZNF629Q9UEG4 869 aaPredicted RBP3.72□□□□□ -1.81
LSM5-205ENST00000409952 APOBEC3BQ9UH17 382 aaKnown RBP3.72□□□□□ -1.81
LSM5-205ENST00000409952 STYXL1Q9Y6J8 313 aa3.72□□□□□ -1.81
LSM5-205ENST00000409952 SMIM23A6NLE4 172 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 SYCE1LA8MT33 242 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 SLC31A2O15432 143 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 SHOX2O60902 331 aaPredicted RBP3.71□□□□□ -1.82
LSM5-205ENST00000409952 CTNSO60931 367 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 SNAP29O95721 258 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 RETP07949 1114 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 CCNE1P24864 410 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 COILP38432 576 aaPredicted RBP3.71□□□□□ -1.82
LSM5-205ENST00000409952 ACTR1BP42025 376 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 CDKN2CP42773 168 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 FGF8P55075 233 aaPredicted RBP3.71□□□□□ -1.82
LSM5-205ENST00000409952 OR12D2P58182 307 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 PPP1CBP62140 327 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 ARFRP1Q13795 201 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 TRAM1Q15629 374 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 UAP1Q16222 522 aaPredicted RBP3.71□□□□□ -1.82
LSM5-205ENST00000409952 OR10J3Q5JRS4 329 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 NIPAL1Q6NVV3 410 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 ZNF613Q6PF04 617 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 BAIAP2L2Q6UXY1 529 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 TMEM156Q8N614 296 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 OR8G5Q8NG78 346 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 OR2G3Q8NGZ4 309 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 ZFAND1Q8TCF1 268 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 DYNC2LI1Q8TCX1 351 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 HBEGFQ99075 208 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 VAT1Q99536 393 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 KIR2DL4Q99706 377 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 C20orf144Q9BQM9 153 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 GABARAPL3Q9BY60 117 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 DERL2Q9GZP9 239 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 PTGES2Q9H7Z7 377 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 SLC25A22Q9H936 323 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 SH2D2AQ9NP31 389 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 RAB23Q9ULC3 237 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 WIF1Q9Y5W5 379 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 USH1CQ9Y6N9 552 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 MAP3K5Q99683 1374 aa3.71□□□□□ -1.82
LSM5-205ENST00000409952 SCN5AQ14524 2016 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 FAM240AA0A1B0GVK7 77 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 SLC5A10A0PJK1 596 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 SLC31A1O15431 190 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 CRXO43186 299 aaPredicted RBP3.7□□□□□ -1.82
LSM5-205ENST00000409952 CYTH3O43739 400 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 GALR3O60755 368 aaPredicted RBP3.7□□□□□ -1.82
LSM5-205ENST00000409952 RDH16O75452 317 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 RBBP9O75884 186 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 RAB36O95755 333 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 HSPD1P10809 573 aaKnown RBP3.7□□□□□ -1.82
LSM5-205ENST00000409952 ERGP11308 486 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 COX7A1P24310 79 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 AQP5P55064 265 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 OR10A3P58181 314 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 SLC35A1P78382 337 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 PRR3P79522 188 aaKnown RBP3.7□□□□□ -1.82
LSM5-205ENST00000409952 CD164Q04900 197 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 PRPSAP1Q14558 356 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 ZNF266Q14584 549 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 CHRFAM7AQ494W8 412 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 CEP85LQ5SZL2 805 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 ZNF658Q5TYW1 1059 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms