RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 SKA3Q8IX90 412 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 LINC00518Q8N0U6 118 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 PLPP7Q8NBV4 271 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 OR8B12Q8NGG6 310 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 CHAC2Q8WUX2 184 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 TSEN15Q8WW01 171 aaKnown RBP4.83□□□□□ -1.64
EPHA4-202ENST00000409854 ORAI1Q96D31 301 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 BOD1Q96IK1 185 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 CMTM3Q96MX0 182 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 SDHCQ99643 169 aaPredicted RBP4.83□□□□□ -1.64
EPHA4-202ENST00000409854 OR2H1Q9GZK4 316 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 SLC25A18Q9H1K4 315 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 ABRACLQ9P1F3 81 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 DHDHQ9UQ10 334 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 SLC5A6Q9Y289 635 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 GTF3C1Q12789 2109 aa4.83□□□□□ -1.64
EPHA4-202ENST00000409854 A0A0U1RQV5 110 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 AIPO00170 330 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 P2RY10O00398 339 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SGCEO43556 437 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SLC19A2O60779 497 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF32P17041 273 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 PTBP1P26599 531 aaKnown RBP eCLIP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SOX2P48431 317 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ARF1P84077 181 aaKnown RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 TAF13Q15543 124 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF79Q15937 498 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ODF4Q2M2E3 257 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SPANXN2Q5MJ10 180 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 IDNKQ5T6J7 187 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 NSUN5P2Q63ZY6 315 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 METAP1DQ6UB28 335 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 C16orf54Q6UWD8 224 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 TFAP2EQ6VUC0 442 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF813Q6ZN06 617 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 Q8NA96 180 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 FGFBP3Q8TAT2 258 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 TRIB1Q96RU8 372 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SLITRK2Q9H156 845 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 TCF7L1Q9HCS4 588 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF319Q9P2F9 582 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 PRSS50Q9UI38 385 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 TUBD1Q9UJT1 453 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 GTF2A1LQ9UNN4 478 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 AK6Q9Y3D8 172 aaKnown RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 TIMM10BQ9Y5J6 103 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 A0A0A6YYJ9 748 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 MBD3L4A6NDZ8 208 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 MBD3L3A6NE82 208 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 MBD3L5A6NJ08 208 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 IFITM5A6NNB3 132 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 E9PLN8 166 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 DOK2O60496 412 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 HPGDSO60760 199 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 CRTAPO75718 401 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 KRT33AO76009 404 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 FARS2O95363 451 aaKnown RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 CNOT4O95628 575 aaKnown RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 COX5BP10606 129 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 TDGF1P3P51864 188 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 FOXG1P55316 489 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SCAND1P57086 179 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 PSG4Q00888 419 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 IFITM3Q01628 133 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 BAMBIQ13145 260 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 MADCAM1Q13477 382 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 KRTCAP3Q53RY4 240 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 FBXW9Q5XUX1 488 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 OR2A2Q6IF42 318 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 FAM166AQ6J272 317 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 DRAM2Q6UX65 266 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 FAM214BQ7L5A3 538 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SLC16A14Q7RTX9 510 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 P4HA3Q7Z4N8 544 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 DPPA2Q7Z7J5 298 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 LYPD6Q86Y78 171 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF100Q8IYN0 542 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF283Q8N7M2 679 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 C9orf106Q8NAJ2 232 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 CCDC54Q8NEL0 328 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 OR13C3Q8NGS6 347 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 OR1F12Q8NHA8 337 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 MBD3L2Q8NHZ7 208 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 EXTL1Q92935 676 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 MRI1Q9BV20 369 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 CCDC32Q9BV29 185 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF275Q9NSD4 429 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 PLEK2Q9NYT0 353 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 UPB1Q9UBR1 384 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 DAPK2Q9UIK4 370 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 RAXQ9Y2V3 346 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 KLF2Q9Y5W3 355 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 V9GY05 133 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 CELSR3Q9NYQ7 3312 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 LOC390937A0A1W2PQ73 354 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 PRSS44E7EML9 344 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 M0R135 149 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 RGS5O15539 181 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 UPK1BO75841 260 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 IL18BPO95998 194 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms