RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 SPSB4Q96A44 273 aa17.65■□□□□ 0.42
VSX1-203ENST00000409285 MGLLQ99685 303 aa17.65■□□□□ 0.42
VSX1-203ENST00000409285 OR10A2Q9H208 303 aa17.65■□□□□ 0.42
VSX1-203ENST00000409285 RGCCQ9H4X1 137 aa17.65■□□□□ 0.42
VSX1-203ENST00000409285 SCOCQ9UIL1 159 aa17.65■□□□□ 0.42
VSX1-203ENST00000409285 TMEM212A6NML5 194 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 OR4C45A6NMZ5 311 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 A6NNC1 897 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 SHISA9B4DS77 424 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 XRCC2O43543 280 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 PLPP2O43688 288 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 NGFP01138 241 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 TTRP02766 147 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 ISG15P05161 165 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 UBCP0CG48 685 aaKnown RBP17.64■□□□□ 0.41
VSX1-203ENST00000409285 ATP6V1B1P15313 513 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 JUNBP17275 347 aaPredicted RBP17.64■□□□□ 0.41
VSX1-203ENST00000409285 ANOS1P23352 680 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 GLRXP35754 106 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 KIR3DL2P43630 455 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 GTF2A1P52655 376 aaPredicted RBP17.64■□□□□ 0.41
VSX1-203ENST00000409285 RPS23P62266 143 aaKnown RBP17.64■□□□□ 0.41
VSX1-203ENST00000409285 SYT6Q5T7P8 510 aaPredicted RBP17.64■□□□□ 0.41
VSX1-203ENST00000409285 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
VSX1-203ENST00000409285 ITFG2Q969R8 447 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 PGAM5Q96HS1 289 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 OPA3Q9H6K4 179 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 ZNF319Q9P2F9 582 aa17.64■□□□□ 0.41
VSX1-203ENST00000409285 FAM221AA4D161 298 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 TACC2O95359 2948 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 PPP1CBP62140 327 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 SNTB2Q13425 540 aaKnown RBP17.63■□□□□ 0.41
VSX1-203ENST00000409285 TPBGQ13641 420 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 SLC22A25Q6T423 547 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 MUL1Q969V5 352 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 PIK3IP1Q96FE7 263 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 OPALINQ96PE5 141 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 ZNF442Q9H7R0 627 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 BRD7Q9NPI1 651 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 NBPF19A0A087WUL8 3843 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 TRBV2A0A0J9YWF9 115 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 CLPTM1O96005 669 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 FAM157BP0CG42 384 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 CPEP16870 476 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 CD53P19397 219 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 CCL1P22362 96 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 CFL1P23528 166 aaKnown RBP17.63■□□□□ 0.41
VSX1-203ENST00000409285 MALLQ13021 153 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 TIGD6Q17RP2 521 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 ADAM5Q6NVV9 412 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 FBXW12Q6X9E4 464 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 ZNF704Q6ZNC4 412 aaPredicted RBP17.63■□□□□ 0.41
VSX1-203ENST00000409285 TMEM171Q8WVE6 324 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 PGLYRP3Q96LB9 341 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 HS3ST6Q96QI5 342 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 STARD10Q9Y365 291 aa17.63■□□□□ 0.41
VSX1-203ENST00000409285 SIRT4Q9Y6E7 314 aaPredicted RBP17.63■□□□□ 0.41
VSX1-203ENST00000409285 C5orf63A6NC05 138 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 GPRIN2O60269 458 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 ZFPL1O95159 310 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 NEDD8Q15843 81 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 GLYATL3Q5SZD4 288 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 SP5Q6BEB4 398 aaPredicted RBP17.62■□□□□ 0.41
VSX1-203ENST00000409285 Q6ZSR3 168 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 KBTBD8Q8NFY9 601 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 OR1J1Q8NGS3 322 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 AKAP1Q92667 903 aaKnown RBP eCLIP17.62■□□□□ 0.41
VSX1-203ENST00000409285 UFD1Q92890 307 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 SGK3Q96BR1 496 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 MARS2Q96GW9 593 aaKnown RBP17.62■□□□□ 0.41
VSX1-203ENST00000409285 CA10Q9NS85 328 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 GTF2A1LQ9UNN4 478 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 SLC22A13Q9Y226 551 aa17.62■□□□□ 0.41
VSX1-203ENST00000409285 LOC390937A0A1W2PQ73 354 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 INMTO95050 263 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 HSMCR30P0CW71 290 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 COX6B1P14854 86 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 CELP19835 753 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 TMEM244Q5VVB8 128 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 MBNL2Q5VZF2 373 aaKnown RBP17.61■□□□□ 0.41
VSX1-203ENST00000409285 PLPP7Q8NBV4 271 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 CCDC54Q8NEL0 328 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 OR5AK2Q8NH90 309 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 REEP6Q96HR9 211 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 REPIN1Q9BWE0 567 aaKnown RBP17.61■□□□□ 0.41
VSX1-203ENST00000409285 COMMD4Q9H0A8 199 aa17.61■□□□□ 0.41
VSX1-203ENST00000409285 DHRS7CA6NNS2 312 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 TBX1O43435 398 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 ZNF250P15622 560 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 GP2P55259 537 aaKnown RBP17.6■□□□□ 0.41
VSX1-203ENST00000409285 ZNF92Q03936 586 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 GK2Q14410 553 aaPredicted RBP17.6■□□□□ 0.41
VSX1-203ENST00000409285 ARMCX4Q5H9R4 360 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 ZFP41Q8N8Y5 198 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 SLC25A40Q8TBP6 338 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 PPP1R14AQ96A00 147 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 PDCD1LG2Q9BQ51 273 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 OR2J1Q9GZK6 312 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 OR51B6Q9H340 312 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 GPR84Q9NQS5 396 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms