RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TRBV11-1A0A0K0K1C0 115 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 MFSD2BA6NFX1 497 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 KRBOX1C9JBD0 128 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ABCD4O14678 606 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 FAHP16930 419 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 DUSP1P28562 367 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 RGS19P49795 217 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 SRYQ05066 204 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ELOCQ15369 112 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 RAET1LQ5VY80 246 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ANKRD16Q6P6B7 361 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ADGRE4PQ86SQ3 457 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 KCNRGQ8N5I3 272 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 PNLDC1Q8NA58 520 aaKnown RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 OR4K17Q8NGC6 315 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 OR5L1Q8NGL2 311 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 LHFPL5Q8TAF8 219 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ASB5Q8WWX0 329 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 PPP4R1LQ9P1A2 415 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 RNF215Q9Y6U7 377 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 TICRRQ7Z2Z1 1910 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 TRAPPC6AO75865 159 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 HEXBP07686 556 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 DBHP09172 617 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 FHITP49789 147 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 FOXF1Q12946 379 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 RAB32Q13637 225 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 TAF9Q16594 264 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 OR52H1Q8NGJ2 320 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 NT5CQ8TCD5 201 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 ZC3H10Q96K80 434 aaKnown RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 OR8B4Q96RC9 309 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 OR5AC2Q9NZP5 309 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 TRAV14DV4A0A0A6YYC5 116 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 H3BP45 60 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 SOX15O60248 233 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 S100A9P06702 114 aaKnown RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 FCGR2AP12318 317 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 FOLR1P15328 257 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 MDKP21741 143 aaPredicted RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 CPT2P23786 658 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 ABCD3P28288 659 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 CASRP41180 1078 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 CAV2P51636 162 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 RPL7L1Q6DKI1 246 aaKnown RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 PEG10Q86TG7 708 aaKnown RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 ATG4DQ86TL0 474 aaPredicted RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 LRP11Q86VZ4 500 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 OR10Z1Q8NGY1 313 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 ST7LQ8TDW4 575 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 C11orf40Q8WZ69 217 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 SLAMF6Q96DU3 332 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 RAB3CQ96E17 227 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 SPSB2Q99619 263 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 LMF2Q9BU23 707 aaKnown RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 TLNRD1Q9H1K6 362 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 GAREM1Q9H706 876 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 NPDC1Q9NQX5 325 aaPredicted RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 GPR173Q9NS66 373 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 ALKBH4Q9NXW9 302 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 C5orf63A6NC05 138 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 TTLL8A6PVC2 850 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 SLC17A2O00624 439 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 CELA2AP08217 269 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 CNR1P21554 472 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 RBMXP38159 391 aaKnown RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 FHL1Q13642 323 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 FZD2Q14332 565 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 IAH1Q2TAA2 248 aaPredicted RBP7.44□□□□□ -1.22
SNX13-201ENST00000409076 ABCA11PQ4W5N1 156 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 C11orf87Q6NUJ2 197 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 CDC20BQ86Y33 519 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 CCDC36Q8IYA8 594 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 TAS2R8Q9NYW2 309 aa7.44□□□□□ -1.22
SNX13-201ENST00000409076 PLXNA2O75051 1894 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 SPTAN1Q13813 2472 aaKnown RBP7.43□□□□□ -1.22
SNX13-201ENST00000409076 RAMP1O60894 148 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 GNRH1P01148 92 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 RAB3AP20336 220 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 TUBG1P23258 451 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 CLDN17P56750 224 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 DRAM2Q6UX65 266 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 C6orf201Q7Z4U5 140 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 FAM71CQ8NEG0 241 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 OR5M9Q8NGP3 310 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 PTPMT1Q8WUK0 201 aaPredicted RBP7.43□□□□□ -1.22
SNX13-201ENST00000409076 SECTM1Q8WVN6 248 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 HGDQ93099 445 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 TMEM59Q9BXS4 323 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 RBM7Q9Y580 266 aaKnown RBP7.43□□□□□ -1.22
SNX13-201ENST00000409076 TRAV36DV7A0A075B6V5 113 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 TRAV20A0A0B4J274 112 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 CSTBP04080 98 aaKnown RBP7.43□□□□□ -1.22
SNX13-201ENST00000409076 GPR3P46089 330 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 ZNF41P51814 821 aaPredicted RBP7.43□□□□□ -1.22
SNX13-201ENST00000409076 SKP2Q13309 424 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 C4orf17Q53FE4 359 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 PAN3Q58A45 887 aaKnown RBP7.43□□□□□ -1.22
SNX13-201ENST00000409076 OR2A2Q6IF42 318 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms