RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 RAP1GDS1P52306 607 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 MLF1P58340 268 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 RAB4BP61018 213 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 RPL10AP62906 217 aaKnown RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 RPS21P63220 83 aaKnown RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 MXD1Q05195 221 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 TSPAN31Q12999 210 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 STX3Q13277 289 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 CLINT1Q14677 625 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 KCTD19Q17RG1 926 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 CCDC58Q4VC31 144 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 LCN12Q6JVE5 192 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 C4orf22Q6V702 233 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 ASCL4Q6XD76 172 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 TMEM150AQ86TG1 271 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR4D6Q8NGJ1 314 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR10G9Q8NGN4 311 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR2A1Q8NGT9 310 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 MCOLN3Q8TDD5 553 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 ECHDC3Q96DC8 303 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 CMTM5Q96DZ9 223 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 TAAR1Q96RJ0 339 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 P2RX4Q99571 388 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 TMEM175Q9BSA9 504 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR51B5Q9H339 312 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 PIGUQ9H490 435 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 GOLPH3Q9H4A6 298 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 RPF2Q9H7B2 306 aaKnown RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 METTL8Q9H825 291 aaKnown RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 BEX1Q9HBH7 125 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 EML4Q9HC35 981 aaKnown RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 DYRK4Q9NR20 520 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 AGPAT4Q9NRZ5 378 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 TNFRSF19Q9NS68 423 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 C19orf12Q9NSK7 152 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 CLN6Q9NWW5 311 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 PLEKHG1Q9ULL1 1385 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 ADGRA3Q8IWK6 1321 aa3.46□□□□□ -1.85
HMGB1P13-201ENST00000406019 KDM5BQ9UGL1 1544 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 A0A1B0GW15 77 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 A0A1B0GW55 424 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 PDZK1P1A8MUH7 402 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 C2orf74A8MZ97 194 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 TMEM114B3SHH9 223 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 KLRC4-KLRK1H3BQV0 150 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 K7EMT4 169 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 ICOSLGO75144 302 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 FKBP6O75344 327 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 SRP72O76094 671 aaKnown RBP3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 AIFM1O95831 613 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 RPS17P08708 135 aaKnown RBP3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 DUX4L2P0CJ85 424 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 DUX4L3P0CJ86 424 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 DUX4L4P0CJ87 422 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 DUX4L5P0CJ88 424 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 DUX4L6P0CJ89 424 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 DUX4L7P0CJ90 424 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 PSKH1P11801 424 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 NR2C1P13056 603 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 CCNOP22674 350 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 GABRR1P24046 479 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 HRH1P35367 487 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 SLCO1A2P46721 670 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR2B6P58173 313 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 NUTF2P61970 127 aaKnown RBP3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 VSNL1P62760 191 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 LCN2P80188 198 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 REEP5Q00765 189 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 CDH17Q12864 832 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR7A5Q15622 319 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 C5orf64Q2M2E5 130 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 TRMT5Q32P41 509 aaKnown RBP3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 FHL5Q5TD97 284 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 GPR107Q5VW38 600 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZNF544Q6NX49 715 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 ULK3Q6PHR2 472 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 DUX4L9Q6RFH8 374 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 S100A7AQ86SG5 101 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 GID4Q8IVV7 300 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 BOD1L2Q8IYS8 172 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 FAM71AQ8IYT1 594 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 FAM58AQ8N1B3 248 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 TRAM1L1Q8N609 369 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 C19orf18Q8NEA5 215 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR4F15Q8NGB8 312 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR10J5Q8NHC4 309 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 TCP10LQ8TDR4 215 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 CA5BP1Q8WTZ4 195 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 NDRG1Q92597 394 aaKnown RBP3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 ESR2Q92731 530 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 TMEM101Q96IK0 257 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 CPB2Q96IY4 423 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 COL21A1Q96P44 957 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 SERPINB12Q96P63 405 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 OLFM3Q96PB7 478 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 TSSK3Q96PN8 268 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 RAB1BQ9H0U4 201 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 SAV1Q9H4B6 383 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms