RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 LBX1P52954 281 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 EMP2P54851 167 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 FOXF1Q12946 379 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 SLC25A53Q5H9E4 307 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 BEX5Q5H9J7 111 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 ELP2Q6IA86 826 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 PGAP1Q75T13 922 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 HOGA1Q86XE5 327 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 OR5T2Q8NGG2 359 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 OR10S1Q8NGN2 331 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 OR4K15Q8NH41 348 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 STOML3Q8TAV4 291 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 RNF138Q8WVD3 245 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 MARC2Q969Z3 335 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 LRRC46Q96FV0 321 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 MRGPRX4Q96LA9 322 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 CHMP1AQ9HD42 196 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-204ENST00000404424 FGF21Q9NSA1 209 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 SRPK3Q9UPE1 567 aa9.54□□□□□ -0.88
CLIP4-204ENST00000404424 GON4LQ3T8J9 2241 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 TRBV6-7A0A0A0MS04 114 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 C2orf72A6NCS6 295 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 CEACAM18A8MTB9 384 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 ATP6V1G2-DDX39BF2Z307 99 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 SSX5O60225 188 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 GLB1P16278 677 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 AKR1C4P17516 323 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 FOXK1P85037 733 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 MC2RQ01718 297 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 SLC22A6Q4U2R8 563 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 TMEM128Q5BJH2 165 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 VAX1Q5SQQ9 334 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 COX15Q7KZN9 410 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 ZNF101Q8IZC7 436 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 ARRDC1Q8N5I2 433 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 ADAD2Q8NCV1 583 aaKnown RBP9.53□□□□□ -0.88
CLIP4-204ENST00000404424 NFAM1Q8NET5 270 aaPredicted RBP9.53□□□□□ -0.88
CLIP4-204ENST00000404424 TMEM185AQ8NFB2 350 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 TERB2Q8NHR7 220 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 KCNG3Q8TAE7 436 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 STT3BQ8TCJ2 826 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 CASTOR1Q8WTX7 329 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 EMC6Q9BV81 110 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 LPAR5Q9H1C0 372 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 SLC6A15Q9H2J7 730 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 SDHAF3Q9NRP4 125 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 MBD2Q9UBB5 411 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 HRH3Q9Y5N1 445 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 A0A0C4DFX4 3053 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 IGLV3-12A0A075B6K2 115 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 IGHV3-20A0A0C4DH32 117 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 C5orf51A6NDU8 294 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 F8VVB4 439 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 F8VWA3 439 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 DNASE2O00115 360 aaPredicted RBP9.53□□□□□ -0.88
CLIP4-204ENST00000404424 IGHG1P01857 330 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 GIMD1P0DJR0 217 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 ZNF41P51814 821 aaPredicted RBP9.53□□□□□ -0.88
CLIP4-204ENST00000404424 CLRN1P58418 232 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 NAAAQ02083 359 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 ATXN7L3Q14CW9 347 aaPredicted RBP9.53□□□□□ -0.88
CLIP4-204ENST00000404424 PNLIPRP3Q17RR3 467 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 RHBDD2Q6NTF9 364 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 WDR74Q6RFH5 385 aaPredicted RBP9.53□□□□□ -0.88
CLIP4-204ENST00000404424 ATRAIDQ6UW56 229 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 KCTD9Q7L273 389 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 ANKRD37Q7Z713 158 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 NAA40Q86UY6 237 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 UEVLDQ8IX04 471 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 BPIFCQ8NFQ6 507 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 OR4K17Q8NGC6 315 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 OR5AP2Q8NGF4 316 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 OR2AJ1Q8NGZ0 328 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 SCGB3A2Q96PL1 93 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 FOXQ1Q9C009 403 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 LMAN1LQ9HAT1 526 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 B3GAT1Q9P2W7 334 aa9.53□□□□□ -0.88
CLIP4-204ENST00000404424 A0A0B4J2A0 478 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 TEX13DA0A0J9YY54 714 aaPredicted RBP9.52□□□□□ -0.89
CLIP4-204ENST00000404424 EEF1E1-BLOC1S5C9J1V9 151 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 H3BML4 177 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 FGF16O43320 207 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 ZNF354AO60765 605 aaPredicted RBP9.52□□□□□ -0.89
CLIP4-204ENST00000404424 PMP2P02689 132 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 TPT1P13693 172 aaKnown RBP9.52□□□□□ -0.89
CLIP4-204ENST00000404424 IL32P24001 234 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 CBX5P45973 191 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 DEFA5Q01523 94 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 ZNF169Q14929 603 aaPredicted RBP9.52□□□□□ -0.89
CLIP4-204ENST00000404424 CCDC157Q569K6 752 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 GLIPR1L1Q6UWM5 242 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 C16orf47Q6ZP98 133 aaPredicted RBP9.52□□□□□ -0.89
CLIP4-204ENST00000404424 SHISA6Q6ZSJ9 500 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 TMPRSS9Q7Z410 1059 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 NOXO1Q8NFA2 376 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 OR51E1Q8TCB6 317 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 PMEPA1Q969W9 287 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 PIK3IP1Q96FE7 263 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 NKX6-2Q9C056 277 aaPredicted RBP9.52□□□□□ -0.89
CLIP4-204ENST00000404424 FAM117AQ9C073 453 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms