RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 LHX6Q9UPM6 363 aa13.96□□□□□ -0.17
TOM1-203ENST00000404284 VDAC3Q9Y277 283 aa13.96□□□□□ -0.17
TOM1-203ENST00000404284 VSIG4Q9Y279 399 aa13.96□□□□□ -0.17
TOM1-203ENST00000404284 PHF3Q92576 2039 aaKnown RBP13.96□□□□□ -0.18
TOM1-203ENST00000404284 RNF224P0DH78 156 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 RD3LP0DJH9 198 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 APOBEC1P41238 236 aaKnown RBP13.95□□□□□ -0.18
TOM1-203ENST00000404284 PTGFRP43088 359 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 SRSF4Q08170 494 aaKnown RBP13.95□□□□□ -0.18
TOM1-203ENST00000404284 C17orf67Q0P5P2 114 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 DBX2Q6ZNG2 339 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 THAP3Q8WTV1 239 aaPredicted RBP13.95□□□□□ -0.18
TOM1-203ENST00000404284 NKD1Q969G9 470 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 MRGPRFQ96AM1 343 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 FGGYQ96C11 551 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 FOXRED1Q96CU9 486 aaPredicted RBP13.95□□□□□ -0.18
TOM1-203ENST00000404284 CMBLQ96DG6 245 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 PAPOLGQ9BWT3 736 aaKnown RBP13.95□□□□□ -0.18
TOM1-203ENST00000404284 SLC2A8Q9NY64 477 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 CPED1A4D0V7 1026 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 CSN2P05814 226 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 SRFP11831 508 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 BDKRB2P30411 391 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 CAPZA1P52907 286 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 QRFPP83859 136 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 MICBQ29980 383 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 FJX1Q86VR8 437 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 BEST3Q8N1M1 668 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 NFAM1Q8NET5 270 aaPredicted RBP13.95□□□□□ -0.18
TOM1-203ENST00000404284 OR52N4Q8NGI2 321 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 OR10S1Q8NGN2 331 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 STT3BQ8TCJ2 826 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 C11orf40Q8WZ69 217 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 ADAT3Q96EY9 351 aaPredicted RBP13.95□□□□□ -0.18
TOM1-203ENST00000404284 OR51M1Q9H341 326 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 KLHL13Q9P2N7 655 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 RAB22AQ9UL26 194 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 ADAMTS9Q9P2N4 1935 aa13.95□□□□□ -0.18
TOM1-203ENST00000404284 SHISA8B8ZZ34 492 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 SMAD9O15198 467 aaKnown RBP13.94□□□□□ -0.18
TOM1-203ENST00000404284 FOSL2P15408 326 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 HSD11B1P28845 292 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 SUMO3P55854 103 aaPredicted RBP13.94□□□□□ -0.18
TOM1-203ENST00000404284 NKPD1Q17RQ9 610 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.94□□□□□ -0.18
TOM1-203ENST00000404284 LIPT2A6NK58 231 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 ZNF208O43345 1280 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 HLA-AP01891 365 aaKnown RBP13.94□□□□□ -0.18
TOM1-203ENST00000404284 LIPCP11150 499 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 CD34P28906 385 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 MEF2DQ14814 521 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 GUCA2BQ16661 112 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 RAB12Q6IQ22 244 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 TRAPPC6BQ86SZ2 158 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 ZNF546Q86UE3 836 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 TMEM17Q86X19 198 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 GVQW1Q8N7I0 195 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 SLAMF6Q96DU3 332 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 NUDT22Q9BRQ3 303 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 EMC6Q9BV81 110 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 FOXQ1Q9C009 403 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 TGIF2Q9GZN2 237 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 PCED1AQ9H1Q7 454 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 B3GAT1Q9P2W7 334 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 METTL21EPA6NDL7 271 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 H3BML4 177 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 GLB1P16278 677 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 MPZP25189 248 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 S100PP25815 95 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 EIF1AXP47813 144 aaKnown RBP13.94□□□□□ -0.18
TOM1-203ENST00000404284 AKR1C2P52895 323 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 BIDP55957 195 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 AKR1C1Q04828 323 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 SNTB1Q13884 538 aaKnown RBP13.94□□□□□ -0.18
TOM1-203ENST00000404284 SLC22A6Q4U2R8 563 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 RNASE10Q5GAN6 216 aaKnown RBP13.94□□□□□ -0.18
TOM1-203ENST00000404284 LPCAT3Q6P1A2 487 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 CD163Q86VB7 1156 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 DDIT4LQ96D03 193 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 C5orf34Q96MH7 638 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 PTGES2Q9H7Z7 377 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 SDHAF3Q9NRP4 125 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 SERINC1Q9NRX5 453 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 CA14Q9ULX7 337 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 MTCH2Q9Y6C9 303 aa13.94□□□□□ -0.18
TOM1-203ENST00000404284 OR5H14A6NHG9 310 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 TMEM200CA6NKL6 621 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 EFNA2O43921 213 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 IGHV2-70P01814 119 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 VSIG8P0DPA2 414 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 MGMTP16455 207 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 ZBTB25P24278 435 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 AGTR1P30556 359 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 AVPI1Q5T686 147 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 ANKRD37Q7Z713 158 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 KMT5CQ86Y97 462 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 SLC25A45Q8N413 288 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 RNF138Q8WVD3 245 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 NUDCD2Q8WVJ2 157 aa13.93□□□□□ -0.18
TOM1-203ENST00000404284 PRRT1Q99946 306 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms