RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ANP32DO95626 131 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 CPSF4O95639 269 aaKnown RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 KRT75O95678 551 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 C6orf47O95873 294 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 GPX2P18283 190 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 FUT1P19526 365 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 CCNA2P20248 432 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 UQCRC2P22695 453 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 MAPK3P27361 379 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR1D4P47884 311 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 CAMLGP49069 296 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 PSME3P61289 254 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 STX4Q12846 297 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 FADDQ13158 208 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 NCF4Q15080 339 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 ACSF3Q4G176 576 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 PIGGQ5H8A4 983 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 SAMD4BQ5PRF9 694 aaKnown RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 ANKRD26P1Q6NSI1 321 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 NANOGP8Q6NSW7 305 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNF600Q6ZNG1 722 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 COX15Q7KZN9 410 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 NET1Q7Z628 596 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 MSRB3Q8IXL7 192 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 DEFB107AQ8IZN7 70 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 CLECL1Q8IZS7 167 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 LYG1Q8N1E2 194 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 MINDY2Q8NBR6 621 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR4A15Q8NGL6 344 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 RHOXF1Q8NHV9 184 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZFP90Q8TF47 636 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 FCGR1BQ92637 280 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 UCN3Q969E3 161 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 CIDECQ96AQ7 238 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 EXOSC8Q96B26 276 aaKnown RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 NEURL3Q96EH8 262 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 ULBP3Q9BZM4 244 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 TRIM4Q9C037 500 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 TMEM38AQ9H6F2 299 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 KAT8Q9H7Z6 458 aaKnown RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 NANOGQ9H9S0 305 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 CXorf21Q9HAI6 301 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 TPT1P8Q9HAU6 139 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 ADAP2Q9NPF8 381 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 THUMPD1Q9NXG2 353 aaKnown RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 SLC25A37Q9NYZ2 338 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 VAPAQ9P0L0 249 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 MBD2Q9UBB5 411 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 PISDQ9UG56 409 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 CD300AQ9UGN4 299 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 BCAP29Q9UHQ4 241 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 NEUROG3Q9Y4Z2 214 aa3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 URB1O60287 2271 aaKnown RBP3.77□□□□□ -1.81
HMGB3P19-201ENST00000403971 DCHS1Q96JQ0 3298 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 APC2O95996 2303 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 IDSB3KWA1 339 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 C21orf140B9A014 251 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 H0YL77 283 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 PDLIM1O00151 329 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 NME4O00746 187 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SSX5O60225 188 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 B4GALT2O60909 372 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 RHBDL1O75783 438 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 KLF7O75840 302 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 TNFSF15O95150 251 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 PSMG1O95456 288 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 NQO1P15559 274 aaKnown RBP3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 ME2P23368 584 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 HTR1EP28566 365 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 CDKN2CP42773 168 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 CCT3P49368 545 aaKnown RBP3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 CDK9P50750 372 aaKnown RBP3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 NCBP2P52298 156 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 EMP2P54851 167 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 BTG2P78543 158 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SRYQ05066 204 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 BNIP2Q12982 314 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 CAPRIN1Q14444 709 aaKnown RBP3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SLC10A1Q14973 349 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 NSDHLQ15738 373 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SLC25A30Q5SVS4 291 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 FHL5Q5TD97 284 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 RNLSQ5VYX0 342 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 AP1ARQ63HQ0 302 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SAXO2Q658L1 398 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 ERICH5Q6P6B1 374 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 TMEM205Q6UW68 189 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNF621Q6ZSS3 439 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 C6orf120Q7Z4R8 191 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 TSEN54Q7Z6J9 526 aaKnown RBP3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 CALHM3Q86XJ0 350 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 SLC30A8Q8IWU4 369 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 C10orf67Q8IYJ2 551 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR2L13Q8N349 312 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 MORN4Q8NDC4 146 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR7G1Q8NGA0 311 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR52E4Q8NGH9 312 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR9A2Q8NGT5 310 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR2Y1Q8NGV0 311 aa3.76□□□□□ -1.81
HMGB3P19-201ENST00000403971 RFESDQ8TAC1 157 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms