RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	FMO6P	O60774	539 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	NDUFA7	O95182	113 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	CH25H	O95992	272 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	NGF	P01138	241 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	PGA4	P0DJD7	388 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	PGA3	P0DJD8	388 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	RPS2	P15880	293 aa	Known RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	BGN	P21810	368 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TUBG1	P23258	451 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	MPV17	P39210	176 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	STX1B	P61266	288 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	PCBD1	P61457	104 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	PPP1CB	P62140	327 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	GNB2	P62879	340 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	MRPS34	P82930	218 aa	Known RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	CDK6	Q00534	326 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	SRSF4	Q08170	494 aa	Known RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	SCARB2	Q14108	478 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	ZMYND11	Q15326	602 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	KLF17	Q5JT82	389 aa	Predicted RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	GPR157	Q5UAW9	335 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	OLFML2A	Q68BL7	652 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TMEM88	Q6PEY1	159 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	NHLRC1	Q6VVB1	395 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	WDR88	Q6ZMY6	472 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	LRRC28	Q86X40	367 aa	Predicted RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	ZNF101	Q8IZC7	436 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TMEM86B	Q8N661	226 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	KIR3DL3	Q8N743	410 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	OR2Z1	Q8NG97	314 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	HDAC2	Q92769	488 aa	Known RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	VPS33A	Q96AX1	596 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	COG8	Q96MW5	612 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	ZNF48	Q96MX3	618 aa	Predicted RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	CITED1	Q99966	193 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	PAIP2	Q9BPZ3	127 aa	Known RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TM2D2	Q9BX73	214 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	OR2J1	Q9GZK6	312 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	WDR55	Q9H6Y2	383 aa	Predicted RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	NOX4	Q9NPH5	578 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	SDR39U1	Q9NRG7	319 aa	Predicted RBP	5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TUBG2	Q9NRH3	451 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	SLC6A13	Q9NSD5	602 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TMCC3	Q9ULS5	477 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	PPP1R3C	Q9UQK1	317 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TRRAP	Q9Y4A5	3859 aa		5.63	□□□□□ -1.51
CEACAM1-208	ENST00000403461	LRRC30	A6NM36	301 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	BLOC1S5-TXNDC5	H3BN57	136 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	KPNA4	O00629	521 aa	Predicted RBP	5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	MMP7	P09237	267 aa	Predicted RBP	5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	IGHV4-38-2	P0DP08	117 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	ZNF32	P17041	273 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	AQP1	P29972	269 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	SEC61A1	P61619	476 aa	Known RBP	5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	PAX8	Q06710	450 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	BST1	Q10588	318 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	NPTX1	Q15818	432 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	SGCA	Q16586	387 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	KRT71	Q3SY84	523 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	C10orf128	Q5T292	105 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	DGAT2L7P	Q6IED9	249 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	SLC27A4	Q6P1M0	643 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	FIP1L1	Q6UN15	594 aa	Known RBP	5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	RFPL4B	Q6ZWI9	263 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	PTOV1	Q86YD1	416 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	ZNF283	Q8N7M2	679 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	OR8B3	Q8NGG8	313 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	OR10S1	Q8NGN2	331 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	AKR7L	Q8NHP1	331 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	FNDC8	Q8TC99	324 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	RAB40A	Q8WXH6	277 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	UPRT	Q96BW1	309 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	FAM71F1	Q96KD3	344 aa	Predicted RBP	5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	POM121L2	Q96KW2	1035 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	C4orf45	Q96LM5	186 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	OR8B2	Q96RD0	313 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	ZNF347	Q96SE7	839 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	MCHR1	Q99705	422 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	ARHGDIG	Q99819	225 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	RBM4B	Q9BQ04	359 aa	Known RBP	5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	QTRT1	Q9BXR0	403 aa	Known RBP	5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	C20orf27	Q9GZN8	174 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	CENPH	Q9H3R5	247 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	INIP	Q9NRY2	104 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TNFRSF19	Q9NS68	423 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	THAP1	Q9NVV9	213 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TAS2R5	Q9NYW4	299 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	PDP1	Q9P0J1	537 aa	Predicted RBP	5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	MIOX	Q9UGB7	285 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	IL19	Q9UHD0	177 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	BAG5	Q9UL15	447 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TIMM10B	Q9Y5J6	103 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	POMT1	Q9Y6A1	747 aa		5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	YLPM1	P49750	1951 aa	Known RBP	5.62	□□□□□ -1.51
CEACAM1-208	ENST00000403461	IGHV2-70D	A0A0C4DH43	119 aa		5.61	□□□□□ -1.51
CEACAM1-208	ENST00000403461	TRAPPC13	A5PLN9	417 aa		5.61	□□□□□ -1.51
CEACAM1-208	ENST00000403461	CPSF4L	A6NMK7	179 aa	Known RBP	5.61	□□□□□ -1.51
CEACAM1-208	ENST00000403461	CEACAM18	A8MTB9	384 aa		5.61	□□□□□ -1.51
CEACAM1-208	ENST00000403461	C12orf71	A8MTZ7	269 aa		5.61	□□□□□ -1.51
CEACAM1-208	ENST00000403461		F5H0A9	414 aa	Predicted RBP	5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms