RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PNLIPRP2P54317 469 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 SQSTM1Q13501 440 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 PLA2G2CQ5R387 149 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 NUDT16L1Q9BRJ7 211 aaKnown RBP17.64■□□□□ 0.42
CCDC47-202ENST00000403162 OR11A1Q9GZK7 315 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 HPF1Q9NWY4 346 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 MKL2Q9ULH7 1088 aa17.64■□□□□ 0.42
CCDC47-202ENST00000403162 DMDP11532 3685 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 LOC100509620A0A075B734 347 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 TMEM218A2RU14 115 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 TLCD2A6NGC4 264 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 FTCDNL1E5RQL4 147 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 P2RY10O00398 339 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 HRH1P35367 487 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 GSK3AP49840 483 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 MMP16P51512 607 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 ARHGDIBP52566 201 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 OR52W1Q6IF63 320 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 LINC00518Q8N0U6 118 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 OR5AP2Q8NGF4 316 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 CMBLQ96DG6 245 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 UQCC2Q9BRT2 126 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 WWTR1Q9GZV5 400 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 CUTCQ9NTM9 273 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 SLC39A1Q9NY26 324 aa17.64■□□□□ 0.41
CCDC47-202ENST00000403162 KLF2Q9Y5W3 355 aaPredicted RBP17.64■□□□□ 0.41
CCDC47-202ENST00000403162 LOC101059948A0A1B0GTJ6 334 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 CRHP06850 196 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ERCC1P07992 297 aaPredicted RBP17.63■□□□□ 0.41
CCDC47-202ENST00000403162 HLA-DOBP13765 273 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 PRKACAP17612 351 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 GFERP55789 205 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 OR1D5P58170 312 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 TCF15Q12870 199 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 RHOUQ7L0Q8 258 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ARMC10Q8N2F6 343 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 SLC22A24Q8N4F4 322 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 CHST4Q8NCG5 386 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ZNF248Q8NDW4 579 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 PRSS33Q8NF86 280 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 NUDCD2Q8WVJ2 157 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ASB10Q8WXI3 467 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 FGGYQ96C11 551 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 PIK3IP1Q96FE7 263 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ZNF175Q9Y473 711 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 MYO15AQ9UKN7 3530 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 TRBV6-7A0A0A0MS04 114 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ZNF208O43345 1280 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 PSMB6P28072 239 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ABCD3P28288 659 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 OR1D4P47884 311 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ZP4Q12836 540 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 SLC22A6Q4U2R8 563 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 TTLL10Q6ZVT0 673 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 LINC00346Q8IVM7 164 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 SVBPQ8N300 66 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ADAD2Q8NCV1 583 aaKnown RBP17.63■□□□□ 0.41
CCDC47-202ENST00000403162 OR6S1Q8NH40 331 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 RNF133Q8WVZ7 376 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 TGM7Q96PF1 710 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 TSNAXQ99598 290 aaKnown RBP17.63■□□□□ 0.41
CCDC47-202ENST00000403162 CHMP1AQ9HD42 196 aaPredicted RBP17.63■□□□□ 0.41
CCDC47-202ENST00000403162 ASF1BQ9NVP2 202 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 FBLN5Q9UBX5 448 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 NDRG3Q9UGV2 375 aa17.63■□□□□ 0.41
CCDC47-202ENST00000403162 FRYLO94915 3013 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 TEX13DA0A0J9YY54 714 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-202ENST00000403162 LNP1A1A4G5 178 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 FADS1O60427 444 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 H2BFMP0C1H6 154 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 VAMP1P23763 118 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 TAS2R31P59538 309 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 NAAAQ02083 359 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 FMODQ06828 376 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 SUMF1Q8NBK3 374 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 OR4K17Q8NGC6 315 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 OR52N4Q8NGI2 321 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 CASTOR1Q8WTX7 329 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-202ENST00000403162 NMES1Q9C002 83 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 FN3KRPQ9HA64 309 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 TMEM100Q9NV29 134 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 FAM206AQ9NX38 181 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 ARID1BQ8NFD5 2236 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-202ENST00000403162 MS4A18H0YCH9 400 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 VSIG8P0DPA2 414 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 DAP3P51398 398 aaKnown RBP17.62■□□□□ 0.41
CCDC47-202ENST00000403162 PNLIPRP3Q17RR3 467 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 MS4A18Q3C1V0 323 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 UNQ6126/PRO20091Q6UXV3 157 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 KCTD9Q7L273 389 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-202ENST00000403162 SLC30A7Q8NEW0 376 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 OR1M1Q8NGA1 313 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 KCNK17Q96T54 332 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 PRRX2Q99811 253 aa17.62■□□□□ 0.41
CCDC47-202ENST00000403162 GPR179Q6PRD1 2367 aa17.61■□□□□ 0.41
CCDC47-202ENST00000403162 NPIPB13A6NJU9 1138 aa17.61■□□□□ 0.41
CCDC47-202ENST00000403162 NUDT19A8MXV4 375 aa17.61■□□□□ 0.41
CCDC47-202ENST00000403162 EEF1E1-BLOC1S5C9J1V9 151 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms