RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 OR13G1Q8NGZ3 307 aa13□□□□□ -0.33
ATG4B-202ENST00000400771 OR51F2Q8NH61 342 aa13□□□□□ -0.33
ATG4B-202ENST00000400771 ZNF420Q8TAQ5 688 aaPredicted RBP13□□□□□ -0.33
ATG4B-202ENST00000400771 RAB1CQ92928 201 aa13□□□□□ -0.33
ATG4B-202ENST00000400771 SPSB4Q96A44 273 aa13□□□□□ -0.33
ATG4B-202ENST00000400771 RAB39BQ96DA2 213 aa13□□□□□ -0.33
ATG4B-202ENST00000400771 TIMD4Q96H15 378 aa13□□□□□ -0.33
ATG4B-202ENST00000400771 ZNF582Q96NG8 517 aaPredicted RBP13□□□□□ -0.33
ATG4B-202ENST00000400771 REPIN1Q9BWE0 567 aaKnown RBP13□□□□□ -0.33
ATG4B-202ENST00000400771 OR51V1Q9H2C8 321 aa13□□□□□ -0.33
ATG4B-202ENST00000400771 ZNF556Q9HAH1 456 aa13□□□□□ -0.33
ATG4B-202ENST00000400771 TMEFF2Q9UIK5 374 aaPredicted RBP13□□□□□ -0.33
ATG4B-202ENST00000400771 PPP1R3CQ9UQK1 317 aa13□□□□□ -0.33
ATG4B-202ENST00000400771 IGHV3-64DA0A0J9YX35 117 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 CD300LBA8K4G0 201 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 PRR32B1ATL7 298 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 F5H0A9 414 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-202ENST00000400771 TMEM178BH3BS89 294 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 PLPP2O43688 288 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 HNF1AP20823 631 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 PAICSP22234 425 aaKnown RBP12.99□□□□□ -0.33
ATG4B-202ENST00000400771 PMELP40967 661 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 CD200P41217 278 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 GATA4P43694 442 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 CX3CR1P49238 355 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 BTG1P62324 171 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 KLHL12Q53G59 568 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 KDM4DQ6B0I6 523 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 PGAP1Q75T13 922 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 ZNF771Q7L3S4 317 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-202ENST00000400771 MRPL21Q7Z2W9 205 aaKnown RBP12.99□□□□□ -0.33
ATG4B-202ENST00000400771 OTOSQ8NHW6 89 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 LRTOMTQ8WZ04 291 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 DVL3Q92997 716 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-202ENST00000400771 OTULINQ96BN8 352 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 GAL3ST1Q99999 423 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 CENPMQ9NSP4 180 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 KIF17Q9P2E2 1029 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 ZNF319Q9P2F9 582 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 ANK2Q01484 3957 aa12.99□□□□□ -0.33
ATG4B-202ENST00000400771 TRAV20A0A0B4J274 112 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 hCG_38984A0A1B0GV85 526 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 ISPDA4D126 451 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 PRKYO43930 277 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 PTBP3O95758 552 aaKnown RBP12.98□□□□□ -0.33
ATG4B-202ENST00000400771 AVPP01185 164 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 HMGN1P05114 100 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 NAA10P41227 235 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-202ENST00000400771 SEC61A1P61619 476 aaKnown RBP12.98□□□□□ -0.33
ATG4B-202ENST00000400771 GRB2P62993 217 aaKnown RBP12.98□□□□□ -0.33
ATG4B-202ENST00000400771 HOXA4Q00056 320 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-202ENST00000400771 MALLQ13021 153 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
ATG4B-202ENST00000400771 TMEM155Q4W5P6 130 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 SLC35D3Q5M8T2 416 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 CXXC5Q7LFL8 322 aaKnown RBP12.98□□□□□ -0.33
ATG4B-202ENST00000400771 AMIGO2Q86SJ2 522 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 OR56B2PQ8NGI1 322 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 TMPRSS13Q9BYE2 586 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 AP4S1Q9Y587 144 aa12.98□□□□□ -0.33
ATG4B-202ENST00000400771 ZAR1LA6NP61 321 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 A8MXK9 166 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 PHF1O43189 567 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-202ENST00000400771 CYB5R3P00387 301 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-202ENST00000400771 ZFP36P26651 326 aaKnown RBP12.97□□□□□ -0.33
ATG4B-202ENST00000400771 THBS2P35442 1172 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 SRP9P49458 86 aaKnown RBP12.97□□□□□ -0.33
ATG4B-202ENST00000400771 ZNF121P58317 390 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-202ENST00000400771 EFNB1P98172 346 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 ZNF181Q2M3W8 571 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 PRAMEF6Q5VXH4 476 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 SLX4IPQ5VYV7 408 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 C12orf73Q69YU5 71 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 RHOUQ7L0Q8 258 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 SHFQ7M4L6 423 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 MOGAT3Q86VF5 341 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 LRRC28Q86X40 367 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-202ENST00000400771 RFLNBQ8N5W9 214 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 CELF2-AS1Q8N7Q2 184 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 Q8TCH9 128 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 ADAT1Q9BUB4 502 aaKnown RBP12.97□□□□□ -0.33
ATG4B-202ENST00000400771 TOR3AQ9H497 397 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 KRT84Q9NSB2 600 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 TMEM100Q9NV29 134 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 UBAP1Q9NZ09 502 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 DNAJC27Q9NZQ0 273 aa12.97□□□□□ -0.33
ATG4B-202ENST00000400771 CEACAM18A8MTB9 384 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 XRCC2O43543 280 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 PNPP00491 289 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 IFNA2P01563 188 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 LYNP07948 512 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 CA6P23280 308 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 FASP25445 335 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 ESRRGP62508 458 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 FAM3AP98173 230 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 SRSF2Q01130 221 aaKnown RBP12.96□□□□□ -0.33
ATG4B-202ENST00000400771 APOFQ13790 326 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 MPPED2Q15777 294 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 FAM201AQ5SY85 155 aa12.96□□□□□ -0.33
ATG4B-202ENST00000400771 SLC16A9Q7RTY1 509 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms