RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 INPP5EQ9NRR6 644 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CBLN4Q9NTU7 201 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 R4GMQ9 66 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 USF3Q68DE3 2245 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 NAV2Q8IVL1 2488 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TMEM269A0A1B0GVZ9 245 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 B9A039 149 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 E9PI62 339 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LILRA1O75019 489 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 IGHV3-13P01766 116 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TTRP02766 147 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 RAF1P04049 648 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 KRT8P05787 483 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ANXA2P07355 339 aaKnown RBP10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 HTR1AP08908 422 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 KITLGP21583 273 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CRHBPP24387 322 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 C21orf33P30042 268 aaPredicted RBP10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PSMB10P40306 273 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 KIR3DL2P43630 455 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 EVX1P49640 407 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 MMP15P51511 669 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 KLF3P57682 345 aaPredicted RBP10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 NANOS3P60323 173 aaKnown RBP10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SLC35A2P78381 396 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF718Q3SXZ3 478 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR2G6Q5TZ20 316 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 AGAP6Q5VW22 663 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 C1orf174Q8IYL3 243 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SYS1Q8N2H4 156 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 YIPF7Q8N8F6 280 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SNX33Q8WV41 574 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SGK3Q96BR1 496 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 HAVCR1Q96D42 359 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CMBLQ96DG6 245 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TMEM80Q96HE8 168 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CCL19Q99731 98 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 REPIN1Q9BWE0 567 aaKnown RBP10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 DUSP21Q9H596 190 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 NUFIP1Q9UHK0 495 aaKnown RBP10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 DUSP13Q9UII6 198 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 GNG8Q9UK08 70 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SLC22A13Q9Y226 551 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 N6AMT1Q9Y5N5 214 aa10.61□□□□□ -0.71
HLA-DQB1-203ENST00000399082 AKAP9Q99996 3911 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 hCG_38984A0A1B0GV85 526 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 IRGMA1A4Y4 181 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 J3QLW9 94 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TBX1O43435 398 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 NDUFS7O75251 213 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 RPP14O95059 124 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LALBAP00709 142 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 APOC1P02654 83 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CDK1P06493 297 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 RAC2P15153 192 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF19P17023 458 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TUBG1P23258 451 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CDKN1AP38936 164 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ALDH3B1P43353 468 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CSNK2BP67870 215 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 IRF3Q14653 427 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF829Q3KNS6 432 aaPredicted RBP10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 WDR38Q5JTN6 314 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 XAF1Q6GPH4 301 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR2T2Q6IF00 324 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 UNQ6126/PRO20091Q6UXV3 157 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 Q6ZR03 302 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CDH24Q86UP0 819 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CATSPERDQ86XM0 798 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZCCHC24Q8N2G6 241 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF786Q8N393 782 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PRSS35Q8N3Z0 413 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF540Q8NDQ6 660 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PGAM5Q96HS1 289 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 COG8Q96MW5 612 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CACNG6Q9BXT2 260 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PBOV1Q9GZY1 135 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TUBG2Q9NRH3 451 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF701Q9NV72 531 aaPredicted RBP10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 FAIMQ9NVQ4 179 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TAAR3PQ9P1P4 343 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ERVK-18Q9QC07 812 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PURGQ9UJV8 347 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 EXOSC1Q9Y3B2 195 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LRRC42Q9Y546 428 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 NOTCH2Q04721 2471 aa10.6□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CHD3Q12873 2000 aaKnown RBP10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 A0A1B0GTI1 187 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZSCAN5BA6NJL1 495 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ACOD1A6NK06 481 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PTGES3LE9PB15 166 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LOC110117498-PIK3R3F6TDL0 507 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 H7C417 338 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 XRCC2O43543 280 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 MT-ND2P03891 347 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 GCH1P30793 250 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PPOXP50336 477 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ACTA2P62736 377 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ACTG2P63267 376 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms