RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TSEN15Q8WW01 171 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 GPR84Q9NQS5 396 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 SH3BGRL2Q9UJC5 107 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 DHDHQ9UQ10 334 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 HIVEP3Q5T1R4 2406 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 IQCMA0A1B0GVH7 501 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 A0A1W2PPK0 400 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 FSTP19883 344 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 BMP5P22003 454 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 ZNF404Q494X3 552 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 CEP78Q5JTW2 689 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 ASPHD2Q6ICH7 369 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 NCCRP1Q6ZVX7 275 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 RELL2Q8NC24 303 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 CCDC54Q8NEL0 328 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 RND1Q92730 232 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 OR10A2Q9H208 303 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 MMP27Q9H306 513 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 TPK1Q9H3S4 243 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 ZCCHC4Q9H5U6 513 aa16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 ZNF275Q9NSD4 429 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 PLEKHB1Q9UF11 243 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-205ENST00000397761 ZNF462Q96JM2 2506 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 A0A075B6Q4 140 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 TRGV8A0A0C4DH27 118 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 A0A0G2JK05 382 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 A0A1B0GVI7 797 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 OR5H1A6NKK0 313 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 SYT7O43581 403 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 ICMTO60725 284 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 CD2P06729 351 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 CBR1P16152 277 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 SNAI3Q3KNW1 292 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 DOK3Q7L591 496 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 LIX1LQ8IVB5 337 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 PARP16Q8N5Y8 322 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 FAM169BQ8N8A8 192 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 TBC1D15Q8TC07 691 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 ORAI1Q96D31 301 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 LYZL4Q96KX0 146 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 ZNF391Q9UJN7 358 aa16.91■□□□□ 0.3
PDLIM2-205ENST00000397761 LOC390937A0A1W2PQ73 354 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 IGKV3-15P01624 115 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 ZNF12P17014 697 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 IGFBP3P17936 291 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 HNRNPA0Q13151 305 aaKnown RBP16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 LRRTM1Q86UE6 522 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 CROCCP3Q8IVE0 287 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 OR13C3Q8NGS6 347 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 MCFD2Q8NI22 146 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 SGK3Q96BR1 496 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 RGCCQ9H4X1 137 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 ELOVL5Q9NYP7 299 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 CRNNQ9UBG3 495 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 FOXJ3Q9UPW0 622 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 AMDHD2Q9Y303 409 aa16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 DIDO1Q9BTC0 2240 aaKnown RBP16.9■□□□□ 0.3
PDLIM2-205ENST00000397761 TRAV8-7A0A075B6U6 113 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 ANKRD61A6NGH8 418 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 LCATP04180 440 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 RAB3BP20337 219 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 CFL1P23528 166 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 HOXC12P31275 282 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 TIMM23BQ5SRD1 257 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 LUZP2Q86TE4 346 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 SPSB4Q96A44 273 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 GFI1Q99684 422 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 SOX7Q9BT81 388 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 MOV10Q9HCE1 1003 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 OSGIN2Q9Y236 505 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 N6AMT1Q9Y5N5 214 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 V9GYS6 101 aa16.89■□□□□ 0.29
PDLIM2-205ENST00000397761 C5orf49A4QMS7 147 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 DHRS7CA6NNS2 312 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 H3BSH0 61 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 TBX1O43435 398 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 LMX1BO60663 402 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 IGLV1-44P01699 117 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 CD37P11049 281 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 ADRA2CP18825 462 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 PAX7P23759 505 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 APLNRP35414 380 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 ZNF529Q6P280 563 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 SLC30A7Q8NEW0 376 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 OR1J2Q8NGS2 313 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 OR14K1Q8NGZ2 314 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 MS4A3Q96HJ5 214 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 SLITRK2Q9H156 845 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 TCF7L1Q9HCS4 588 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 SLC25A15Q9Y619 301 aa16.88■□□□□ 0.29
PDLIM2-205ENST00000397761 HELZ2Q9BYK8 2649 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 A0A1W2PR80 420 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 EEF1E1-BLOC1S5C9J1V9 151 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 J3QW42 95 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 PDCD5O14737 125 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 EEF1E1O43324 174 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 XRCC2O43543 280 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 DHRS3O75911 302 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 C1QL1O75973 258 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 PRB1P04280 392 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms