RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 M0QZ24 198 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 SOCS2O14508 198 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 SOX14O95416 240 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 RAD23AP54725 363 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 CD47Q08722 323 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 LRRC36Q1X8D7 754 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 LPCAT4Q643R3 524 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 ASPHD2Q6ICH7 369 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 BTNL3Q6UXE8 466 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 KLBQ86Z14 1044 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 ALDH16A1Q8IZ83 802 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 LRRC75AQ8NAA5 344 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 TEX47Q8TBZ9 253 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 RAB40AQ8WXH6 277 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 GPX7Q96SL4 187 aaPredicted RBP13.44□□□□□ -0.26
CUX2-202ENST00000397643 CHIAQ9BZP6 476 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 EGLN3Q9H6Z9 239 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 MARCH7Q9H992 704 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 TMEM165Q9HC07 324 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 GCM1Q9NP62 436 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 TBC1D23Q9NUY8 699 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 TBCCD1Q9NVR7 557 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 IL20Q9NYY1 176 aa13.44□□□□□ -0.26
CUX2-202ENST00000397643 KIR2DS1A0A191URI9 304 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 ZNF205O95201 554 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 ABHD16AO95870 558 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 ALPLP05186 524 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 CD14P08571 375 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 RPS2P15880 293 aaKnown RBP13.43□□□□□ -0.26
CUX2-202ENST00000397643 ZNF26P17031 533 aaPredicted RBP13.43□□□□□ -0.26
CUX2-202ENST00000397643 CPT2P23786 658 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 POU1F1P28069 291 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 PEX2P28328 305 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 RPS6KA3P51812 740 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 FXYD6P3P58550 94 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 ESRRGP62508 458 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 SLC36A3Q495N2 470 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 OGFRL1Q5TC84 451 aaPredicted RBP13.43□□□□□ -0.26
CUX2-202ENST00000397643 HIST2H2BDQ6DRA6 164 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 Q6YL49 198 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 IGFN1Q86VF2 1251 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 C1QL4Q86Z23 238 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 PACRGLQ8N7B6 248 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 NPEPL1Q8NDH3 523 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 SLC29A1Q99808 456 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 IFT27Q9BW83 186 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 TSSK6Q9BXA6 273 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 VCXQ9H320 206 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 TXNIPQ9H3M7 391 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 TNFRSF19Q9NS68 423 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 GRHPRQ9UBQ7 328 aa13.43□□□□□ -0.26
CUX2-202ENST00000397643 TIMM23O14925 209 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 IDH3BO43837 385 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 MITFO75030 526 aaPredicted RBP13.42□□□□□ -0.26
CUX2-202ENST00000397643 SCG5P05408 212 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 SELEP16581 610 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 CRISP1P54107 249 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 RPL27P61353 136 aaKnown RBP13.42□□□□□ -0.26
CUX2-202ENST00000397643 PCBD1P61457 104 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 GNB2P62879 340 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 TOP3AQ13472 1001 aaPredicted RBP13.42□□□□□ -0.26
CUX2-202ENST00000397643 CLEC12AQ5QGZ9 265 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 FAM205BPQ63HN1 556 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 GPR139Q6DWJ6 353 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 GALNT4Q8N4A0 578 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 OR2T33Q8NG76 320 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 ZNF420Q8TAQ5 688 aaPredicted RBP13.42□□□□□ -0.26
CUX2-202ENST00000397643 ZDHHC16Q969W1 377 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 CMBLQ96DG6 245 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 ALG12Q9BV10 488 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 TEX12Q9BXU0 123 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 VCX3BQ9H321 246 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 NRIP3Q9NQ35 241 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 NDRG4Q9ULP0 352 aaKnown RBP13.42□□□□□ -0.26
CUX2-202ENST00000397643 BAIAP2Q9UQB8 552 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 IER3IP1Q9Y5U9 82 aa13.42□□□□□ -0.26
CUX2-202ENST00000397643 NBEAL2Q6ZNJ1 2754 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 A6NIZ1 184 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 IMPA2O14732 288 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 SURF4O15260 269 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 PPP1R3DO95685 299 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 TSPAN15O95858 294 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 CYB5R3P00387 301 aaPredicted RBP13.41□□□□□ -0.26
CUX2-202ENST00000397643 MELTFP08582 738 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 COX5BP10606 129 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 NR2C1P13056 603 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 RAP1BP61224 184 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 RAP1AP62834 184 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 RUSC1-AS1Q66K80 236 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 SLC27A4Q6P1M0 643 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 SYT9Q86SS6 491 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 TMEM86BQ8N661 226 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 OR8D4Q8NGM9 314 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 HAVCR1Q96D42 359 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 NEIL1Q96FI4 390 aaPredicted RBP13.41□□□□□ -0.26
CUX2-202ENST00000397643 ZNF570Q96NI8 536 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 ERMAPQ96PL5 475 aaPredicted RBP13.41□□□□□ -0.26
CUX2-202ENST00000397643 NUDT16L1Q9BRJ7 211 aaKnown RBP13.41□□□□□ -0.26
CUX2-202ENST00000397643 TMEM246Q9BRR3 403 aa13.41□□□□□ -0.26
CUX2-202ENST00000397643 RIBC2Q9H4K1 309 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms