RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RAB3CQ96E17 227 aa9.28□□□□□ -0.92
CPSF1P1-201ENST00000397477 SPSB2Q99619 263 aa9.28□□□□□ -0.92
CPSF1P1-201ENST00000397477 CDX2Q99626 313 aaPredicted RBP9.28□□□□□ -0.92
CPSF1P1-201ENST00000397477 ZNF416Q9BWM5 594 aa9.28□□□□□ -0.92
CPSF1P1-201ENST00000397477 TMEM59Q9BXS4 323 aa9.28□□□□□ -0.92
CPSF1P1-201ENST00000397477 PRRG4Q9BZD6 226 aa9.28□□□□□ -0.92
CPSF1P1-201ENST00000397477 CHMP1AQ9HD42 196 aaPredicted RBP9.28□□□□□ -0.92
CPSF1P1-201ENST00000397477 FAM221AA4D161 298 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 SIGLEC5O15389 551 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 STK17BO94768 372 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 TTRP02766 147 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 S100A11P31949 105 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 H2BFSP57053 126 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 DEFA5Q01523 94 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 SIGLEC14Q08ET2 396 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 TMUB2Q71RG4 321 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 BIVMQ86UB2 503 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 MARCH1Q8TCQ1 289 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 ELP5Q8TE02 316 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 DNASE2BQ8WZ79 361 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 CYYR1Q96J86 154 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 MRGPRX4Q96LA9 322 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 ZNF385AQ96PM9 386 aaKnown RBP9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 ALKBH3Q96Q83 286 aaPredicted RBP9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 GSX2Q9BZM3 304 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 RAB33BQ9H082 229 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 PRMT8Q9NR22 394 aaPredicted RBP9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 ZNF275Q9NSD4 429 aaPredicted RBP9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 KANTRA0A1W2PQU2 76 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 ANGPTL7O43827 346 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 NPIPB7O75200 414 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 SCGB1D2O95969 90 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 CSTBP04080 98 aaKnown RBP9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 P04436 131 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 JMJD7P0C870 316 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 ATF4P18848 351 aaPredicted RBP9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 FOLR3P41439 243 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 SSR4P51571 173 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 CAPZA1P52907 286 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 PLPPR5Q32ZL2 321 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 TMEM104Q8NE00 496 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 THAP6Q8TBB0 222 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 B3GNT2Q9NY97 397 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 SOCS1O15524 211 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 APOC3P02656 99 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 GIPP09681 153 aaPredicted RBP9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 PPP3CBP16298 524 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 BLVRBP30043 206 aaPredicted RBP9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 SHBQ15464 509 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 THEM4Q5T1C6 240 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 OPN5Q6U736 354 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 C5orf46Q6UWT4 87 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 GSG1LQ6UXU4 331 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 NOXO1Q8NFA2 376 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 OR8B12Q8NGG6 310 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 TOMM40LQ969M1 308 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 KLK13Q9UKR3 277 aa9.27□□□□□ -0.93
CPSF1P1-201ENST00000397477 FTCDNL1E5RQL4 147 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 HOXB5P09067 269 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 CD96P40200 585 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 C20orf196Q8IYI0 205 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 SLC38A6Q8IZM9 456 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 INO80EQ8NBZ0 244 aaPredicted RBP9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 RADILQ96JH8 1075 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 ZCCHC4Q9H5U6 513 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 G6PC2Q9NQR9 355 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 GPR173Q9NS66 373 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 RAB22AQ9UL26 194 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 COLQQ9Y215 455 aaPredicted RBP9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 A0A1B0GTQ1 180 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 IGF2P01344 180 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 ERCC1P07992 297 aaPredicted RBP9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 AKR1C2P52895 323 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 STARD6P59095 220 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 AKR1C1Q04828 323 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 SCRN3Q0VDG4 424 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 ELFN2Q5R3F8 820 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 TMEM17Q86X19 198 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 NUBPLQ8TB37 319 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 ST7LQ8TDW4 575 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 TTC9Q92623 222 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 CXorf58Q96LI9 332 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 PIGLQ9Y2B2 252 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 CD1AP06126 327 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 VSIG8P0DPA2 414 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 DLSTP36957 453 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 LUMP51884 338 aaPredicted RBP9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 FXYD4P59646 89 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 DHRS2Q13268 280 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 ESX1Q8N693 406 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 NEK7Q8TDX7 302 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 CMTM3Q96MX0 182 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 GPR137Q96N19 417 aa9.26□□□□□ -0.93
CPSF1P1-201ENST00000397477 MCRIP1C9JLW8 97 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 K7ESF4 209 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 CXCL13O43927 109 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 B4GALT1P15291 398 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 NAGAP17050 411 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 GDF1P27539 372 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms