RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ZNF671Q8TAW3 534 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 YIPF5Q969M3 257 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 TMEM106AQ96A25 262 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 ABCG5Q9H222 651 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 MMP28Q9H239 520 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 UPB1Q9UBR1 384 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 Q9UFV3 132 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 FOXD3Q9UJU5 478 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-207ENST00000397200 PROCRQ9UNN8 238 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 NBASA2RRP1 2371 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 ESPL1Q14674 2120 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 FAM208BQ5VWN6 2430 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 TPPPO94811 219 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 FSTP19883 344 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 OPRM1P35372 400 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 EIF2B2P49770 351 aaKnown RBP13.06□□□□□ -0.32
CAPN3-207ENST00000397200 KCNMB1Q16558 191 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 HES5Q5TA89 166 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 TSPO2Q5TGU0 170 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 ASPHD2Q6ICH7 369 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 SLC25A47Q6Q0C1 308 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 DCXRQ7Z4W1 244 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 CMTM4Q8IZR5 234 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 UBE2J2Q8N2K1 259 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 C11orf40Q8WZ69 217 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 STARD4Q96DR4 205 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 ULBP2Q9BZM5 246 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 LINC00470Q9BZP3 86 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 LIN7BQ9HAP6 207 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 G6PC2Q9NQR9 355 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 OR5V1Q9UGF6 321 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 CYB5R1Q9UHQ9 305 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 RALYQ9UKM9 306 aaKnown RBP13.06□□□□□ -0.32
CAPN3-207ENST00000397200 FREM1Q5H8C1 2179 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 IL18BPO95998 194 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 IGHV3-9P01782 118 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 QDPRP09417 244 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 ACHEP22303 614 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 LAP3P28838 519 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 SLC6A1P30531 599 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 ZNF133P52736 654 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-207ENST00000397200 SLC36A2Q495M3 483 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 PHYHD1Q5SRE7 291 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 PLET1Q6UQ28 207 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 TFAP2EQ6VUC0 442 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-207ENST00000397200 ZNF433Q8N7K0 673 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-207ENST00000397200 OR6F1Q8NGZ6 308 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 SMIM4Q8WVI0 70 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 RAB40AQ8WXH6 277 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 ALKBH3Q96Q83 286 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-207ENST00000397200 MARVELD1Q9BSK0 173 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 PLEKHA1Q9HB21 404 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 PLSCR4Q9NRQ2 329 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 SLC7A10Q9NS82 523 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 ZNF629Q9UEG4 869 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-207ENST00000397200 PRSS50Q9UI38 385 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 SLC22A13Q9Y226 551 aa13.06□□□□□ -0.32
CAPN3-207ENST00000397200 MYO7BQ6PIF6 2116 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 HMX3A6NHT5 357 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 A6NIN4 97 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 ZNF587BE7ETH6 402 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 EEF1E1O43324 174 aaKnown RBP13.05□□□□□ -0.32
CAPN3-207ENST00000397200 IGFBP3P17936 291 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-207ENST00000397200 BMP5P22003 454 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 BTCP35070 178 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 INPP1P49441 399 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 MMP16P51512 607 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 GPR176Q14439 515 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 CARTPTQ16568 116 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 PLA1AQ53H76 456 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 FBXW9Q5XUX1 488 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 ZNF57Q68EA5 555 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-207ENST00000397200 LRFN4Q6PJG9 635 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 ABHD12BQ7Z5M8 362 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-207ENST00000397200 ASB5Q8WWX0 329 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 HDHD2Q9H0R4 259 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 CRLF2Q9HC73 371 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 GPR35Q9HC97 309 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 FBXL3Q9UKT7 428 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 FOXJ3Q9UPW0 622 aa13.05□□□□□ -0.32
CAPN3-207ENST00000397200 FAM240BA0A1B0GVZ2 78 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 SULT1B1O43704 296 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 CGAP01215 116 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 HLA-DMAP28067 261 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 ZNF84P51523 738 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 FAPQ12884 760 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 C10orf128Q5T292 105 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 FAM166AQ6J272 317 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 MTFR2Q6P444 385 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 RHOUQ7L0Q8 258 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 LINC00346Q8IVM7 164 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 TSEN15Q8WW01 171 aaKnown RBP13.04□□□□□ -0.32
CAPN3-207ENST00000397200 UPRTQ96BW1 309 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 HAVCR1Q96D42 359 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 C7orf50Q9BRJ6 194 aaKnown RBP13.04□□□□□ -0.32
CAPN3-207ENST00000397200 RBM24Q9BX46 236 aaKnown RBP13.04□□□□□ -0.32
CAPN3-207ENST00000397200 OPN3Q9H1Y3 402 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-207ENST00000397200 PIGMQ9H3S5 423 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms