RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 WDR76Q9H967 626 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 GCM1Q9NP62 436 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 MRPL15Q9P015 296 aaKnown RBP11.78□□□□□ -0.52
SEC13-204ENST00000397099 PCDHB10Q9UN67 800 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 CACNG2Q9Y698 323 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 STAB1Q9NY15 2570 aa11.78□□□□□ -0.52
SEC13-204ENST00000397099 A0A0A6YYJ9 748 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 WNT9BO14905 357 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 IGHV2-70P01814 119 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 GYPBP06028 91 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 IRF2P14316 349 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 HSD11B1P28845 292 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 MDH2P40926 338 aaKnown RBP11.77□□□□□ -0.53
SEC13-204ENST00000397099 ESRRGP62508 458 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 SRSF2Q01130 221 aaKnown RBP11.77□□□□□ -0.53
SEC13-204ENST00000397099 LINC01590Q5TEZ4 76 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 TMEM179BQ7Z7N9 219 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 LRRC28Q86X40 367 aaPredicted RBP11.77□□□□□ -0.53
SEC13-204ENST00000397099 OR5AS1Q8N127 324 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 FTMTQ8N4E7 242 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 ZNF511Q8NB15 262 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 OR52H1Q8NGJ2 320 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 OR10S1Q8NGN2 331 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 OR5K1Q8NHB7 308 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 RNF133Q8WVZ7 376 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 SLCO4A1Q96BD0 722 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 OTULINQ96BN8 352 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 SLC25A19Q9HC21 320 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 PAPOLBQ9NRJ5 636 aaKnown RBP11.77□□□□□ -0.53
SEC13-204ENST00000397099 CENPMQ9NSP4 180 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 ZNF391Q9UJN7 358 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 FBN3Q75N90 2809 aa11.77□□□□□ -0.53
SEC13-204ENST00000397099 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.76□□□□□ -0.53
SEC13-204ENST00000397099 GGT3PA6NGU5 568 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 TMEM178BH3BS89 294 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 FASP25445 335 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 EIF2B1Q14232 305 aaKnown RBP11.76□□□□□ -0.53
SEC13-204ENST00000397099 KCNJ8Q15842 424 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 KRTAP24-1Q3LI83 254 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 C1orf146Q5VVC0 180 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 DCAF12L2Q5VW00 463 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 ERI1Q8IV48 349 aaKnown RBP11.76□□□□□ -0.53
SEC13-204ENST00000397099 OR6N2Q8NGY6 317 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 ZNRF4Q8WWF5 429 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 UTP4Q969X6 686 aaKnown RBP11.76□□□□□ -0.53
SEC13-204ENST00000397099 DUS3LQ96G46 650 aaKnown RBP11.76□□□□□ -0.53
SEC13-204ENST00000397099 OSBPL10Q9BXB5 764 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 RGCCQ9H4X1 137 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 NIPAL2Q9H841 368 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 TRIM36Q9NQ86 728 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 G6PC2Q9NQR9 355 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 POLR3KQ9Y2Y1 108 aaPredicted RBP11.76□□□□□ -0.53
SEC13-204ENST00000397099 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
SEC13-204ENST00000397099 FAM183AA6NL82 134 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 CD300LBA8K4G0 201 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 PLPP2O43688 288 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 CIB2O75838 187 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 LYNP07948 512 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 SBK2P0C263 348 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 CLUP10909 449 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 CD200P41217 278 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 ERFP50548 548 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 MMP16P51512 607 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 ATP6AP1Q15904 470 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 FAHD2BQ6P2I3 314 aaPredicted RBP11.75□□□□□ -0.53
SEC13-204ENST00000397099 FAHD1Q6P587 224 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 DPY19L4Q7Z388 723 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 NAA40Q86UY6 237 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.75□□□□□ -0.53
SEC13-204ENST00000397099 ZDHHC13Q8IUH4 622 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 TIGD4Q8IY51 512 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 C10orf67Q8IYJ2 551 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 IQCF1Q8N6M8 205 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 BHLHE23Q8NDY6 225 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 OR10AD1Q8NGE0 317 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 OR11L1Q8NGX0 322 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 Q8TCH9 128 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 SPSB4Q96A44 273 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 FAHD2AQ96GK7 314 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 SIGLEC11Q96RL6 698 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 C19orf24Q9BVV8 132 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 OR51V1Q9H2C8 321 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 PATZ1Q9HBE1 687 aaKnown RBP11.75□□□□□ -0.53
SEC13-204ENST00000397099 LPAR2Q9HBW0 351 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 UBAP1Q9NZ09 502 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 MIOXQ9UGB7 285 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 LRCH1Q9Y2L9 728 aa11.75□□□□□ -0.53
SEC13-204ENST00000397099 G3V2T6 193 aa11.74□□□□□ -0.53
SEC13-204ENST00000397099 MLNRO43193 412 aa11.74□□□□□ -0.53
SEC13-204ENST00000397099 TCF21O43680 179 aa11.74□□□□□ -0.53
SEC13-204ENST00000397099 PTBP3O95758 552 aaKnown RBP11.74□□□□□ -0.53
SEC13-204ENST00000397099 H2BFMP0C1H6 154 aa11.74□□□□□ -0.53
SEC13-204ENST00000397099 RPS27P42677 84 aaKnown RBP11.74□□□□□ -0.53
SEC13-204ENST00000397099 CX3CR1P49238 355 aa11.74□□□□□ -0.53
SEC13-204ENST00000397099 PRKXP51817 358 aa11.74□□□□□ -0.53
SEC13-204ENST00000397099 CRISP1P54107 249 aa11.74□□□□□ -0.53
SEC13-204ENST00000397099 ZNF92Q03936 586 aa11.74□□□□□ -0.53
SEC13-204ENST00000397099 OR8G1Q15617 311 aa11.74□□□□□ -0.53
SEC13-204ENST00000397099 SNAPC1Q16533 368 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms