RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 LRP3O75074 770 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 OPN1LWP04000 364 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 SFTA3P0C7M3 94 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 DAP3P51398 398 aaKnown RBP13.14□□□□□ -0.31
CCNF-202ENST00000397066 GFERP55789 205 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 C1orf189Q5VU69 101 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 CARD17Q5XLA6 110 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 GRINAQ7Z429 371 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 SLC22A18ASQ8N1D0 253 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 ZSCAN4Q8NAM6 433 aaPredicted RBP13.14□□□□□ -0.31
CCNF-202ENST00000397066 DTWD2Q8NBA8 298 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 LMX1AQ8TE12 382 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 TMEM234Q8WY98 164 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 MAFIPQ8WZ33 124 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 KLHDC7BQ96G42 594 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 VSX1Q9NZR4 365 aaPredicted RBP13.14□□□□□ -0.31
CCNF-202ENST00000397066 FREM3P0C091 2139 aa13.14□□□□□ -0.31
CCNF-202ENST00000397066 GLAP06280 429 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 CTHP32929 405 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 RBMXP38159 391 aaKnown RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 PPT1P50897 306 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 PNLIPRP2P54317 469 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 KRBOX4Q5JUW0 171 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 LCN10Q6JVE6 187 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 OR2I1PQ8NGU4 316 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 NUBPLQ8TB37 319 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 ZNF519Q8TB69 540 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 TMEM59Q9BXS4 323 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 SEC11CQ9BY50 192 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 PBOV1Q9GZY1 135 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 CUTCQ9NTM9 273 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 ZNF701Q9NV72 531 aaPredicted RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 DZANK1Q9NVP4 752 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 SLC2A8Q9NY64 477 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 CTSFQ9UBX1 484 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 C14orf166Q9Y224 244 aaKnown RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 WIF1Q9Y5W5 379 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 SDK1Q7Z5N4 2213 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 IL2RAP01589 272 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 SNRPEP62304 92 aaKnown RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 CHRFAM7AQ494W8 412 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 IL34Q6ZMJ4 242 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 ZNF813Q6ZN06 617 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 NANPQ8TBE9 248 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 PHOSPHO2Q8TCD6 241 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 ADAT3Q96EY9 351 aaPredicted RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 SLC22A11Q9NSA0 550 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 EHFQ9NZC4 300 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 RNASEK-C17orf49H0YIS7 233 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 IL11P20809 199 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 RAB32Q13637 225 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 OR51T1Q8NGJ9 327 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 RRNAD1Q96FB5 475 aaKnown RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 ZC3H10Q96K80 434 aaKnown RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 NMES1Q9C002 83 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 G6PC2Q9NQR9 355 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 OR5AC2Q9NZP5 309 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 SLC5A6Q9Y289 635 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 FLVCR1Q9Y5Y0 555 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 HS3ST3A1Q9Y663 406 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 PIAS3Q9Y6X2 628 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 TDRD6O60522 2096 aaKnown RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 MICBQ29980 383 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 KIF26BQ2KJY2 2108 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 CLEC18BQ6UXF7 455 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 PTX4Q96A99 478 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 GAS2L1Q99501 681 aaPredicted RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 URM1Q9BTM9 101 aaKnown RBP13.13□□□□□ -0.31
CCNF-202ENST00000397066 LPAR3Q9UBY5 353 aa13.13□□□□□ -0.31
CCNF-202ENST00000397066 C5orf67F2Z3F1 127 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 MBTPS2O43462 519 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 SNRNP70P08621 437 aaKnown RBP13.12□□□□□ -0.31
CCNF-202ENST00000397066 ABOP16442 354 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 ZNF14P17017 642 aaPredicted RBP13.12□□□□□ -0.31
CCNF-202ENST00000397066 BIDP55957 195 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 GPR85P60893 370 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 UNC119Q13432 240 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 DHRS7BQ6IAN0 325 aaPredicted RBP13.12□□□□□ -0.31
CCNF-202ENST00000397066 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 GLYATL2Q8WU03 294 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 SFT2D1Q8WV19 159 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 LSM5Q9Y4Y9 91 aaKnown RBP13.12□□□□□ -0.31
CCNF-202ENST00000397066 MSGN1A6NI15 193 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 TBPP20226 339 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 ZNF616Q08AN1 781 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 SLC30A7Q8NEW0 376 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 SLC26A10Q8NG04 563 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 UQCC2Q9BRT2 126 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 PRH1P02810 166 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 CHRM2P08172 466 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 MUC1P15941 1255 aaPredicted RBP13.12□□□□□ -0.31
CCNF-202ENST00000397066 CLRN1P58418 232 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 DCAF7P61962 342 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 ELAVL1Q15717 326 aaKnown RBP13.12□□□□□ -0.31
CCNF-202ENST00000397066 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
CCNF-202ENST00000397066 ZNF283Q8N7M2 679 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 OR51F2Q8NH61 342 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms