RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 PRKACGP22612 351 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 POU1F1P28069 291 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 GRK5P34947 590 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 CDKN2AP42771 156 aaKnown RBP13.68□□□□□ -0.22
CLTA-203ENST00000396603 SRP9P49458 86 aaKnown RBP13.68□□□□□ -0.22
CLTA-203ENST00000396603 MMP16P51512 607 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 LCN6P62502 163 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 ESRRGP62508 458 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLTA-203ENST00000396603 BTNL3Q6UXE8 466 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 HS3ST5Q8IZT8 346 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 OR8G5Q8NG78 346 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 OR52E2Q8NGJ4 325 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 OR2T4Q8NH00 348 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 OR1F12Q8NHA8 337 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 APOBEC3DQ96AK3 386 aaPredicted RBP13.68□□□□□ -0.22
CLTA-203ENST00000396603 UPRTQ96BW1 309 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 PLEKHA8Q96JA3 519 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 COQ7Q99807 217 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 RBM4BQ9BQ04 359 aaKnown RBP13.68□□□□□ -0.22
CLTA-203ENST00000396603 SSBP3Q9BWW4 388 aaPredicted RBP13.68□□□□□ -0.22
CLTA-203ENST00000396603 HDHD2Q9H0R4 259 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 POFUT1Q9H488 388 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 KRT84Q9NSB2 600 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 ASH2LQ9UBL3 628 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 MIOXQ9UGB7 285 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 PCDHGB1Q9Y5G3 927 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 WNK2Q9Y3S1 2297 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 CEACAM18A8MTB9 384 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 WNT2P09544 360 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 SELEP16581 610 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 BPIFB3P59826 476 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 PAX2Q02962 417 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 BAMBIQ13145 260 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 SLC35F1Q5T1Q4 408 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 PTCHD4Q6ZW05 846 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 C1orf87Q8N0U7 546 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 SDR9C7Q8NEX9 313 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 GJC3Q8NFK1 279 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 OR8D4Q8NGM9 314 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 ERGIC1Q969X5 290 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 DACT3Q96B18 629 aaPredicted RBP13.67□□□□□ -0.22
CLTA-203ENST00000396603 ZNF582Q96NG8 517 aaPredicted RBP13.67□□□□□ -0.22
CLTA-203ENST00000396603 NMNAT3Q96T66 252 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 MS4A7Q9GZW8 240 aaPredicted RBP13.67□□□□□ -0.22
CLTA-203ENST00000396603 SLITRK2Q9H156 845 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 SEMA6AQ9H2E6 1030 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 RERGLQ9H628 205 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 OAZ3Q9UMX2 235 aa13.67□□□□□ -0.22
CLTA-203ENST00000396603 LRRC30A6NM36 301 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 IQCF6A8MYZ5 107 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 H3BNX3 289 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 PLATP00750 562 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 GATA4P43694 442 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 CENPAP49450 140 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 BLVRAP53004 296 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 SEC61A1P61619 476 aaKnown RBP13.66□□□□□ -0.22
CLTA-203ENST00000396603 HIST1H3AP68431 136 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 CCDC92Q53HC0 331 aaPredicted RBP13.66□□□□□ -0.22
CLTA-203ENST00000396603 HIST2H3PS2Q5TEC6 136 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 HIST2H3AQ71DI3 136 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 ZNF771Q7L3S4 317 aaPredicted RBP13.66□□□□□ -0.22
CLTA-203ENST00000396603 CELF2-AS1Q8N7Q2 184 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 MEGF10Q96KG7 1140 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 C1orf147Q96MC9 270 aaPredicted RBP13.66□□□□□ -0.22
CLTA-203ENST00000396603 PKP2Q99959 881 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 SLC30A2Q9BRI3 323 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 NUAK2Q9H093 628 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 RPRD1BQ9NQG5 326 aaKnown RBP13.66□□□□□ -0.22
CLTA-203ENST00000396603 CMC2Q9NRP2 79 aa13.66□□□□□ -0.22
CLTA-203ENST00000396603 TRRAPQ9Y4A5 3859 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 IGHV2-70DA0A0C4DH43 119 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 A0A1B0GUS0 222 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 SAC3D1A6NKF1 404 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 RPS2P15880 293 aaKnown RBP13.65□□□□□ -0.22
CLTA-203ENST00000396603 CD80P33681 288 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 DAPP51397 102 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 CRISP1P54107 249 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 GINS1Q14691 196 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 OCLNQ16625 522 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 KDM4DQ6B0I6 523 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 NLRC3Q7RTR2 1065 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 ZBTB46Q86UZ6 589 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 KLBQ86Z14 1044 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 PQLC1Q8N2U9 271 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 PROKR2Q8NFJ6 384 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 OR4Q3Q8NH05 313 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 RAB40AQ8WXH6 277 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 NEIL1Q96FI4 390 aaPredicted RBP13.65□□□□□ -0.22
CLTA-203ENST00000396603 ZNF48Q96MX3 618 aaPredicted RBP13.65□□□□□ -0.22
CLTA-203ENST00000396603 C9orf16Q9BUW7 83 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 PRDM13Q9H4Q3 707 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 TMEM165Q9HC07 324 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 SLC25A19Q9HC21 320 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 KCNG2Q9UJ96 466 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 B9D1Q9UPM9 204 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 COA3Q9Y2R0 106 aaPredicted RBP13.65□□□□□ -0.22
CLTA-203ENST00000396603 POLR1DQ9Y2S0 133 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 MMP24Q9Y5R2 645 aa13.65□□□□□ -0.22
CLTA-203ENST00000396603 ERICH4A6NGS2 130 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms