RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 OR8B4Q96RC9 309 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 RHOFQ9HBH0 211 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 MEIKINA0A087WXM9 373 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 ETFDHQ16134 617 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 CLEC12BQ2HXU8 276 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 ZBTB37Q5TC79 503 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 LSRQ86X29 649 aaPredicted RBP12.72□□□□□ -0.37
COL4A3-202ENST00000396578 EMC6Q9BV81 110 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 TIMM10BQ9Y5J6 103 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 SIGLEC1Q9BZZ2 1709 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 SCO1O75880 301 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 PMCHP20382 165 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 UBE2MP61081 183 aaKnown RBP12.72□□□□□ -0.37
COL4A3-202ENST00000396578 GPR84Q9NQS5 396 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 KCND3Q9UK17 655 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 M0R082 166 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 HMGN4O00479 90 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 TPOP07202 933 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 CYBAP13498 195 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 GLRA1P23415 457 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 GALR1P47211 349 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 DLEU7Q6UYE1 221 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 SLC39A11Q8N1S5 342 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 TMEM99Q8N816 258 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 EXD3Q8N9H8 876 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 OR2T6Q8NHC8 308 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 DHCR7Q9UBM7 475 aaKnown RBP12.72□□□□□ -0.37
COL4A3-202ENST00000396578 C5orf49A4QMS7 147 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 ZAR1LA6NP61 321 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 GPX5O75715 221 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 NKAIN4Q8IVV8 208 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF740Q8NDX6 193 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 OR5M1Q8NGP8 315 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 P2RY12Q9H244 342 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 IGHV3-9P01782 118 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 CTSLP07711 333 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 NQO2P16083 231 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 OPRM1P35372 400 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 SHHQ15465 462 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 ASTLQ6HA08 431 aaPredicted RBP12.72□□□□□ -0.37
COL4A3-202ENST00000396578 CORO6Q6QEF8 472 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 SIRPB1O00241 398 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 CST5P28325 142 aaPredicted RBP12.71□□□□□ -0.37
COL4A3-202ENST00000396578 RPS16P62249 146 aaKnown RBP12.71□□□□□ -0.37
COL4A3-202ENST00000396578 ELAVL1Q15717 326 aaKnown RBP12.71□□□□□ -0.37
COL4A3-202ENST00000396578 DHRS7BQ6IAN0 325 aaPredicted RBP12.71□□□□□ -0.37
COL4A3-202ENST00000396578 TOMM20LQ6UXN7 152 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 TAF1P21675 1872 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 M0R135 149 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 PLRG1O43660 514 aaKnown RBP12.71□□□□□ -0.37
COL4A3-202ENST00000396578 MMP15P51511 669 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 FABP5Q01469 135 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 TAS1R1Q7RTX1 841 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 ANGPTL6Q8NI99 470 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF799Q96GE5 643 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 KIR3DX1Q9H7L2 352 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 ANKRD61A6NGH8 418 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 OR2J2O76002 312 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 MLF2Q15773 248 aaPredicted RBP12.71□□□□□ -0.37
COL4A3-202ENST00000396578 MARCH1Q8TCQ1 289 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 FLVCR2Q9UPI3 526 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 R4GMQ9 66 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 SH2D7A6NKC9 451 aaPredicted RBP12.71□□□□□ -0.37
COL4A3-202ENST00000396578 AKR7A2O43488 359 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 NPPBP16860 134 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 ANKRD10Q9NXR5 420 aa12.71□□□□□ -0.37
COL4A3-202ENST00000396578 SNRNP200O75643 2136 aaKnown RBP12.71□□□□□ -0.38
COL4A3-202ENST00000396578 RNASEK-C17orf49H0YIS7 233 aa12.71□□□□□ -0.38
COL4A3-202ENST00000396578 BMPR1BO00238 502 aa12.71□□□□□ -0.38
COL4A3-202ENST00000396578 ZNF429Q86V71 674 aa12.71□□□□□ -0.38
COL4A3-202ENST00000396578 OR4S1Q8NGB4 309 aa12.71□□□□□ -0.38
COL4A3-202ENST00000396578 WDR61Q9GZS3 305 aaKnown RBP12.71□□□□□ -0.38
COL4A3-202ENST00000396578 DUSP8Q13202 625 aa12.71□□□□□ -0.38
COL4A3-202ENST00000396578 RLN3Q8WXF3 142 aa12.71□□□□□ -0.38
COL4A3-202ENST00000396578 WDR89Q96FK6 387 aaPredicted RBP12.71□□□□□ -0.38
COL4A3-202ENST00000396578 CD3DP04234 171 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 DHRS4L2Q6PKH6 230 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 MRPL43Q8N983 215 aaKnown RBP12.7□□□□□ -0.38
COL4A3-202ENST00000396578 VAMP5O95183 116 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 AKAP11Q9UKA4 1901 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 ALOX12BO75342 701 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 TPBGQ13641 420 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 IL10RAQ13651 578 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 BLNKQ8WV28 456 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 GALMQ96C23 342 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 SMIM12Q96EX1 92 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 MBLAC1A4D2B0 266 aaPredicted RBP12.7□□□□□ -0.38
COL4A3-202ENST00000396578 ZNF749O43361 778 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 MIDNQ504T8 468 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 ZADH2Q8N4Q0 377 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 S1PR5Q9H228 398 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 AAMDCQ9H7C9 122 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 ZNF346Q9UL40 294 aaKnown RBP12.7□□□□□ -0.38
COL4A3-202ENST00000396578 TMEM127O75204 238 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 SLC2A10O95528 541 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 NHLH1Q02575 133 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 NHLH2Q02577 135 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 KIF13BQ9NQT8 1826 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 ARRDC5A6NEK1 342 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms