RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 PRR32B1ATL7 298 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 IGHV3-13P01766 116 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 RAF1P04049 648 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 ERCC1P07992 297 aaPredicted RBP18.3■□□□□ 0.52
FXN-202ENST00000396364 HTR1AP08908 422 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 DANCRP0C864 163 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 LIMS3P0CW19 117 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 LIMS4P0CW20 117 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 OR12D2P58182 307 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 GABARAPL2P60520 117 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 ERVS71-1P61550 626 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 SLC35A2P78381 396 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 NKPD1Q17RQ9 610 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 SNAI3Q3KNW1 292 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 RNLSQ5VYX0 342 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 OR52N1Q8NH53 320 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 SYT3Q9BQG1 590 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 MRPL37Q9BZE1 423 aaKnown RBP18.3■□□□□ 0.52
FXN-202ENST00000396364 PBOV1Q9GZY1 135 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 DUSP21Q9H596 190 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 DYNLRB1Q9NP97 96 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 ACOXLQ9NUZ1 547 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 RTTNQ86VV8 2226 aa18.3■□□□□ 0.52
FXN-202ENST00000396364 IGLV3-9A0A075B6K5 115 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 MAGEB4O15481 346 aaPredicted RBP18.29■□□□□ 0.52
FXN-202ENST00000396364 TIMM8AO60220 97 aaPredicted RBP18.29■□□□□ 0.52
FXN-202ENST00000396364 MRPS14O60783 128 aaKnown RBP18.29■□□□□ 0.52
FXN-202ENST00000396364 DNASE1P24855 282 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 ETV1P50549 477 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 GFOD2Q3B7J2 385 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 GLYATL3Q5SZD4 288 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 PRSS45Q7RTY3 260 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 COMMD2Q86X83 199 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 FTMTQ8N4E7 242 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 HAVCR1Q96D42 359 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 CMBLQ96DG6 245 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 REEP6Q96HR9 211 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 SIGLEC11Q96RL6 698 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 RHNO1Q9BSD3 238 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 TRAF4Q9BUZ4 470 aaPredicted RBP18.29■□□□□ 0.52
FXN-202ENST00000396364 MND1Q9BWT6 205 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 CCDC90BQ9GZT6 254 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 MS4A5Q9H3V2 200 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 UBAP1Q9NZ09 502 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 OR52A1Q9UKL2 312 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 FZR1Q9UM11 496 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 LRCH1Q9Y2L9 728 aa18.29■□□□□ 0.52
FXN-202ENST00000396364 A0A0U1RQV5 110 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 M0R233 179 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 DDOSTP39656 456 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 GK2Q14410 553 aaPredicted RBP18.28■□□□□ 0.52
FXN-202ENST00000396364 OR8B12Q8NGG6 310 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 SPRYD4Q8WW59 207 aaPredicted RBP18.28■□□□□ 0.52
FXN-202ENST00000396364 RORBQ92753 470 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 NINJ1Q92982 152 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 SPSB4Q96A44 273 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 LURAP1Q96LR2 239 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 CDCA4Q9BXL8 241 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 TRIM36Q9NQ86 728 aa18.28■□□□□ 0.52
FXN-202ENST00000396364 NOP16Q9Y3C1 178 aaKnown RBP18.28■□□□□ 0.52
FXN-202ENST00000396364 DSCAMO60469 2012 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 GGT3PA6NGU5 568 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 MTRF1O75570 445 aaKnown RBP18.27■□□□□ 0.52
FXN-202ENST00000396364 SOD3P08294 240 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 UBCP0CG48 685 aaKnown RBP18.27■□□□□ 0.52
FXN-202ENST00000396364 KITLGP21583 273 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 C21orf33P30042 268 aaPredicted RBP18.27■□□□□ 0.52
FXN-202ENST00000396364 CCR9P51686 369 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 TAS2R43P59537 309 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 PSG7Q13046 419 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 SWI5Q1ZZU3 235 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 CCDC58Q4VC31 144 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 FDX2Q6P4F2 183 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 PRSS48Q7RTY5 328 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 CATSPERDQ86XM0 798 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 ELMOD2Q8IZ81 293 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 CCDC54Q8NEL0 328 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 PELI1Q96FA3 418 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 REPIN1Q9BWE0 567 aaKnown RBP18.27■□□□□ 0.52
FXN-202ENST00000396364 TAAR3PQ9P1P4 343 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 ST6GALNAC2Q9UJ37 374 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 PURGQ9UJV8 347 aaKnown RBP18.27■□□□□ 0.52
FXN-202ENST00000396364 DCHS2Q6V1P9 2916 aa18.27■□□□□ 0.52
FXN-202ENST00000396364 ROS1P08922 2347 aa18.27■□□□□ 0.51
FXN-202ENST00000396364 CENPEQ02224 2701 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 SRSF10O75494 262 aaKnown RBP18.26■□□□□ 0.51
FXN-202ENST00000396364 CLPTM1O96005 669 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 ATP6V1B1P15313 513 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 ZNF12P17014 697 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 MPV17P39210 176 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 TGM4P49221 684 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 PPOXP50336 477 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 WNT4P56705 351 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 KRTAP10-9P60411 292 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 ZNF92Q03936 586 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 MFGE8Q08431 387 aaPredicted RBP18.26■□□□□ 0.51
FXN-202ENST00000396364 HLXQ14774 488 aaPredicted RBP18.26■□□□□ 0.51
FXN-202ENST00000396364 OR2AE1Q8NHA4 323 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 SGK3Q96BR1 496 aa18.26■□□□□ 0.51
FXN-202ENST00000396364 TRMT61AQ96FX7 289 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms