RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 LIPNQ5VXI9 398 aa8.59□□□□□ -1.03
DDX39B-202ENST00000396172 TMEM108Q6UXF1 575 aa8.59□□□□□ -1.03
DDX39B-202ENST00000396172 FGFBP3Q8TAT2 258 aa8.59□□□□□ -1.03
DDX39B-202ENST00000396172 RNF167Q9H6Y7 350 aa8.59□□□□□ -1.03
DDX39B-202ENST00000396172 ACOXLQ9NUZ1 547 aa8.59□□□□□ -1.03
DDX39B-202ENST00000396172 RALYQ9UKM9 306 aaKnown RBP8.59□□□□□ -1.03
DDX39B-202ENST00000396172 LSM2Q9Y333 95 aaKnown RBP8.59□□□□□ -1.03
DDX39B-202ENST00000396172 R4GMQ9 66 aa8.59□□□□□ -1.03
DDX39B-202ENST00000396172 A0A1W2PR80 420 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 WIPF3A6NGB9 483 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 TUBAL3A6NHL2 446 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 F5H5K5 113 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 PTAFRP25105 342 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 APEX1P27695 318 aaKnown RBP8.58□□□□□ -1.04
DDX39B-202ENST00000396172 S100A5P33763 92 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 GALK2Q01415 458 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 TIGD6Q17RP2 521 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 BCL2L15Q5TBC7 163 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 FDX2Q6P4F2 183 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 RPL22L1Q6P5R6 122 aaKnown RBP8.58□□□□□ -1.04
DDX39B-202ENST00000396172 PARP16Q8N5Y8 322 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 OR52H1Q8NGJ2 320 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 UFD1Q92890 307 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 PELI1Q96FA3 418 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 ZNF75AQ96N20 296 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 COMMD4Q9H0A8 199 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 NOX3Q9HBY0 568 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 EIF3KQ9UBQ5 218 aaKnown RBP8.58□□□□□ -1.04
DDX39B-202ENST00000396172 ZNF391Q9UJN7 358 aa8.58□□□□□ -1.04
DDX39B-202ENST00000396172 USP9XQ93008 2570 aaPredicted RBP8.58□□□□□ -1.04
DDX39B-202ENST00000396172 PLCE1Q9P212 2302 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 TMEM269A0A1B0GVZ9 245 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 C5orf49A4QMS7 147 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 TMEM212A6NML5 194 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 PRR32B1ATL7 298 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 M0R1B8 84 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 PSMD9O00233 223 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CASKO14936 926 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 SSX4O60224 188 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 RPP14O95059 124 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 GOSR1O95249 250 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CRYAAP02489 173 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ADRA2AP08913 450 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ACSM4P0C7M7 580 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 TUBG1P23258 451 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CCR9P51686 369 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 GPR50Q13585 617 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 KRTAP27-1Q3LI81 207 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 AGAP6Q5VW22 663 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 SEZ6L2Q6UXD5 910 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 KLBQ86Z14 1044 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 WFDC8Q8IUA0 241 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ZNF584Q8IVC4 421 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ZNF485Q8NCK3 441 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CPEB3Q8NE35 698 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 OR5L1Q8NGL2 311 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 GATAD2BQ8WXI9 593 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 THRSPQ92748 146 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 POM121L2Q96KW2 1035 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 MGLLQ99685 303 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 OPA3Q9H6K4 179 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ESRP2Q9H6T0 727 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ISG20L2Q9H9L3 353 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 NEK6Q9HC98 313 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 TUBG2Q9NRH3 451 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 NUFIP1Q9UHK0 495 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 GTF2A1LQ9UNN4 478 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 SPEF1Q9Y4P9 236 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CADP27708 2225 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 A0A075B6Q4 140 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 XRCC2O43543 280 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 GPRIN2O60269 458 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ICMTO60725 284 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CD1AP06126 327 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ANXA2P07355 339 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CECR9P0C854 216 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 UBCP0CG48 685 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 HSMCR30P0CW71 290 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CD53P19397 219 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 PSMA1P25786 263 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ZNF83P51522 516 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 PRKXP51817 358 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 RPS23P62266 143 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ALKBH1Q13686 389 aaKnown RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CDK5R1Q15078 307 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CDSNQ15517 529 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 TRAM1Q15629 374 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 TIMM50Q3ZCQ8 353 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 ZNF704Q6ZNC4 412 aaPredicted RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 CELF2-AS1Q8N7Q2 184 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 APOBEC3DQ96AK3 386 aaPredicted RBP8.57□□□□□ -1.04
DDX39B-202ENST00000396172 SMIM19Q96E16 107 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 PGAM5Q96HS1 289 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 WFIKKN1Q96NZ8 548 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 OR10A2Q9H208 303 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 FAM206AQ9NX38 181 aa8.57□□□□□ -1.04
DDX39B-202ENST00000396172 IGHV1-18A0A0C4DH31 117 aa8.56□□□□□ -1.04
DDX39B-202ENST00000396172 CCNOP22674 350 aa8.56□□□□□ -1.04
DDX39B-202ENST00000396172 CFL1P23528 166 aaKnown RBP8.56□□□□□ -1.04
DDX39B-202ENST00000396172 ZNF121P58317 390 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms