RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CYHR1Q6ZMK1 362 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 HSD17B11Q8NBQ5 300 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 PATE1Q8WXA2 126 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 GSX2Q9BZM3 304 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 IGHV3-20A0A0C4DH32 117 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 B3GALT4O96024 378 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 PHYHD1Q5SRE7 291 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 GPX8Q8TED1 209 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 COMMD5Q9GZQ3 224 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 PBOV1Q9GZY1 135 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 DUSP21Q9H596 190 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 POMT2Q9UKY4 750 aa4.95□□□□□ -1.62
VPS13C-204ENST00000395898 DICER1Q9UPY3 1922 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 MEIKINA0A087WXM9 373 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF816-ZNF321PA0A0X1KG74 233 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 FITM1A5D6W6 292 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 ANKUB1A6NFN9 424 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SHISA7A6NL88 538 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 LY86O95711 162 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 ARRB2P32121 409 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 GNB1P62873 340 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SLC17A1Q14916 467 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 MPPED2Q15777 294 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SPANXN5Q5MJ07 72 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 ACTR3CQ9C0K3 210 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 DEFB127Q9H1M4 99 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 KPTNQ9Y664 436 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 HRH1P35367 487 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SRP9P49458 86 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 AGFG1P52594 562 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 FXNQ16595 210 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 OR10R2Q8NGX6 335 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 TAAR6Q96RI8 345 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 FN3KRPQ9HA64 309 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 GPR173Q9NS66 373 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 AK3Q9UIJ7 227 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 ST3GAL6Q9Y274 331 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SEC14L6B5MCN3 397 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 NXPH3O95157 252 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 CEACAM5P06731 702 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 HCCSP53701 268 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 PIGPP57054 158 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF121P58317 390 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 FAHD1Q6P587 224 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 STAC2Q6ZMT1 411 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SLC38A6Q8IZM9 456 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 MRPS24Q96EL2 167 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 MED30Q96HR3 178 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 CMTM3Q96MX0 182 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 PTPRZ1P23471 2315 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 TERTO14746 1132 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 CTSLP07711 333 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 ZBTB25P24278 435 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 CDK5R1Q15078 307 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 OIT3Q8WWZ8 545 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 KISS1RQ969F8 398 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 CCDC74BQ96LY2 380 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 UQCC2Q9BRT2 126 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 NKX6-2Q9C056 277 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 COL24A1Q17RW2 1714 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 A0A087WUJ7 227 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 TGOLN2O43493 480 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 ANGPTL7O43827 346 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 H3F3CQ6NXT2 135 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 TSEN54Q7Z6J9 526 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 OR10Z1Q8NGY1 313 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 LOXL2Q9Y4K0 774 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 A0A1B0GUH1 482 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 A0A1B0GVG6 124 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 PDGFAP04085 211 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 PCSK6P29122 969 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 UBE2IP63279 158 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 TAGLNQ01995 201 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM128Q5BJH2 165 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 ELFN2Q5R3F8 820 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 C17orf78Q8N4C9 275 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 NOXO1Q8NFA2 376 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 PINX1Q96BK5 328 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 NMES1Q9C002 83 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 OSGIN2Q9Y236 505 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 A0A0A6YYJ9 748 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SLC22A20A6NK97 555 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 PPP1R2P9O14990 202 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SNCGO76070 127 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 RAB1AP62820 205 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 PXDC1Q5TGL8 231 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 RPUSD3Q6P087 351 aaKnown RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 OR2A1Q8NGT9 310 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SPSB1Q96BD6 273 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 FKBP11Q9NYL4 201 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 HEATR5BQ9P2D3 2071 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 MGMTP16455 207 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 M6PRP20645 277 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 COX5AP20674 150 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SCAND1P57086 179 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 DUSP2Q05923 314 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SLC36A1Q7Z2H8 476 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 OR2G2Q8NGZ5 317 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 APOBEC3DQ96AK3 386 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-204ENST00000395898 TBX21Q9UL17 535 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms