RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 GPR160Q9UJ42 338 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 LAMP5Q9UJQ1 280 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 TPRKBQ9Y3C4 175 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 PCDHGB1Q9Y5G3 927 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF469Q96JG9 3925 aaPredicted RBP14.11□□□□□ -0.15
CXCL1-201ENST00000395761 LYNX1G3V0Z9 82 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 J3QRE1 110 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 PSMD9O00233 223 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 XPNPEP2O43895 674 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 NCR1O76036 304 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 APOL3O95236 402 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 HPXP02790 462 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 H2BFMP0C1H6 154 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 LYNX1P0DP58 116 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 CD99P14209 185 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 FLNAP21333 2647 aaKnown RBP14.11□□□□□ -0.15
CXCL1-201ENST00000395761 KITLGP21583 273 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 CRHBPP24387 322 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 CX3CR1P49238 355 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 GK2Q14410 553 aaPredicted RBP14.11□□□□□ -0.15
CXCL1-201ENST00000395761 OR2T2Q6IF00 324 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 LRRN1Q6UXK5 716 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 RHOUQ7L0Q8 258 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 SLC35F2Q8IXU6 374 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF786Q8N393 782 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 RFLNBQ8N5W9 214 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 OR51G2Q8NGK0 314 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 SNX33Q8WV41 574 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 MNTQ99583 582 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 TTTY10Q9BZA0 68 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 DUSP21Q9H596 190 aa14.11□□□□□ -0.15
CXCL1-201ENST00000395761 FGF20Q9NP95 211 aaPredicted RBP14.11□□□□□ -0.15
CXCL1-201ENST00000395761 F8P00451 2351 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 IGHV4-30-2A0A087WSY4 118 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 H7C1Q1 480 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 SPRY3O43610 288 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 TIMM8AO60220 97 aaPredicted RBP14.1□□□□□ -0.15
CXCL1-201ENST00000395761 FAM20BO75063 409 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 FADS2O95864 444 aaKnown RBP14.1□□□□□ -0.15
CXCL1-201ENST00000395761 IGHV1-46P01743 117 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 ERCC1P07992 297 aaPredicted RBP14.1□□□□□ -0.15
CXCL1-201ENST00000395761 DAOP14920 347 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 HSD11B1P28845 292 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF81P51508 661 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF121P58317 390 aaPredicted RBP14.1□□□□□ -0.15
CXCL1-201ENST00000395761 TSTQ16762 297 aaKnown RBP14.1□□□□□ -0.15
CXCL1-201ENST00000395761 GLYATL3Q5SZD4 288 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 CLEC2AQ6UVW9 174 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 Q6ZR03 302 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 PRSS45Q7RTY3 260 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.1□□□□□ -0.15
CXCL1-201ENST00000395761 OR5AS1Q8N127 324 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 OR2AE1Q8NHA4 323 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 JAM3Q9BX67 310 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 DLL4Q9NR61 685 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF319Q9P2F9 582 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 BLOC1S6Q9UL45 172 aa14.1□□□□□ -0.15
CXCL1-201ENST00000395761 ACANP16112 2415 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 PLSCR5A0PG75 271 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 RNF223E7ERA6 249 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 MAGEB4O15481 346 aaPredicted RBP14.09□□□□□ -0.15
CXCL1-201ENST00000395761 LILRA1O75019 489 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 MT-ND5P03915 603 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 ANXA2P07355 339 aaKnown RBP14.09□□□□□ -0.15
CXCL1-201ENST00000395761 OR2T7P0C7T2 308 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 COL8A2P25067 703 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 DCKP27707 260 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 ATP6V1E1P36543 226 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 CHN2P52757 468 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 DSCR9P59020 149 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 SLC35A2P78381 396 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 CCL8P80075 99 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF92Q03936 586 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 MALLQ13021 153 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 CARTPTQ16568 116 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 SPRNQ5BIV9 151 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 FAM57BQ71RH2 274 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 LURAP1LQ8IV03 231 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF540Q8NDQ6 660 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 OR52I1Q8NGK6 324 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 OR2T27Q8NH04 317 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 C10orf105Q8TEF2 133 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 UBASH3BQ8TF42 649 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 FAM168AQ92567 244 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 NR1H4Q96RI1 486 aaPredicted RBP14.09□□□□□ -0.15
CXCL1-201ENST00000395761 RHNO1Q9BSD3 238 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 BRD7Q9NPI1 651 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 LRP12Q9Y561 859 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 TMEM14AQ9Y6G1 99 aa14.09□□□□□ -0.15
CXCL1-201ENST00000395761 SMAD7O15105 426 aaKnown RBP14.08□□□□□ -0.16
CXCL1-201ENST00000395761 TBX1O43435 398 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 MRPS14O60783 128 aaKnown RBP14.08□□□□□ -0.16
CXCL1-201ENST00000395761 IGHA1P01876 353 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 LIPAP38571 399 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 PDLIM4P50479 330 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 ROM1Q03395 351 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 ST3GAL4Q11206 333 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 PCGF3Q3KNV8 242 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 RNLSQ5VYX0 342 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 KCTD18Q6PI47 426 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms