RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 NR0B1P51843 470 aaKnown RBP12.77□□□□□ -0.37
CLIP2-203ENST00000395060 POLR2GP62487 172 aaKnown RBP eCLIP12.77□□□□□ -0.37
CLIP2-203ENST00000395060 MICBQ29980 383 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.37
CLIP2-203ENST00000395060 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 Q6ZSR6 202 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 SLC26A10Q8NG04 563 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 OR8U1Q8NH10 309 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.37
CLIP2-203ENST00000395060 BCL2L14Q9BZR8 327 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 SOHLH2Q9NX45 425 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 RCC2Q9P258 522 aaKnown RBP12.77□□□□□ -0.37
CLIP2-203ENST00000395060 NME2P1O60361 137 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 ZNF354AO60765 605 aaPredicted RBP12.77□□□□□ -0.37
CLIP2-203ENST00000395060 FAM157CP0CG43 387 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 VSIG8P0DPA2 414 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 FHITP49789 147 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 EMP2P54851 167 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 ZNF616Q08AN1 781 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 RIPPLY1Q0D2K3 151 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 MEF2DQ14814 521 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 DHRS11Q6UWP2 260 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 CATSPERDQ86XM0 798 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 NAXEQ8NCW5 288 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 MAP3K3Q99759 626 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 MMP26Q9NRE1 261 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 A0A1W2PPH5 198 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 FGF16O43320 207 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 MBTPS2O43462 519 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 H2AFB1P0C5Y9 115 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 ABCD3P28288 659 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 KIR2DL1P43626 348 aaPredicted RBP12.76□□□□□ -0.37
CLIP2-203ENST00000395060 ARFRP1Q13795 201 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 CLINT1Q14677 625 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 ANKRD55Q3KP44 614 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 NCMAPQ5T1S8 102 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 CLEC18BQ6UXF7 455 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 OR13H1Q8NG92 308 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 MIOXQ9UGB7 285 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 COLCA2A8K830 154 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 C1orf196B1AJZ1 125 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 H2BFMP0C1H6 154 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 BCKDHBP21953 392 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 HHEXQ03014 270 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 LINC00469Q8N7U9 141 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 OR52N5Q8NH56 324 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 EDAQ92838 391 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 C8orf44Q96CB5 159 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 TAF9BQ9HBM6 251 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 SLC2A4RGQ9NR83 387 aa12.76□□□□□ -0.37
CLIP2-203ENST00000395060 PHF3Q92576 2039 aaKnown RBP12.76□□□□□ -0.37
CLIP2-203ENST00000395060 TEX13DA0A0J9YY54 714 aaPredicted RBP12.75□□□□□ -0.37
CLIP2-203ENST00000395060 SSX5O60225 188 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 ZNF217O75362 1048 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 C1QL1O75973 258 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 DUS4LO95620 317 aaKnown RBP12.75□□□□□ -0.37
CLIP2-203ENST00000395060 CD79AP11912 226 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 RPL27P61353 136 aaKnown RBP12.75□□□□□ -0.37
CLIP2-203ENST00000395060 ISXQ2M1V0 245 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 TTLL10Q6ZVT0 673 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.75□□□□□ -0.37
CLIP2-203ENST00000395060 FAM71F1Q96KD3 344 aaPredicted RBP12.75□□□□□ -0.37
CLIP2-203ENST00000395060 SEC61A2Q9H9S3 476 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 LSM5Q9Y4Y9 91 aaKnown RBP12.75□□□□□ -0.37
CLIP2-203ENST00000395060 A0A1B0GTQ1 180 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 ZNF44P15621 663 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 ANOS1P23352 680 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 NTSR1P30989 418 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 ASCL1P50553 236 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 Q6ZRG5 221 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 PGAP1Q75T13 922 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 AQP3Q92482 292 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 GPER1Q99527 375 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 SEC11CQ9BY50 192 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 TBL1XR1Q9BZK7 514 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 C5orf66Q9H5L9 145 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 ELL3Q9HB65 397 aaPredicted RBP12.75□□□□□ -0.37
CLIP2-203ENST00000395060 H3BML4 177 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 SYT7O43581 403 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 IL12BP29460 328 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 GLO1Q04760 184 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 FAM24BQ8N5W8 94 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 SLC30A7Q8NEW0 376 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 OR51E1Q8TCB6 317 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 CD300LFQ8TDQ1 290 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 VDAC3Q9Y277 283 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 CARHSP1Q9Y2V2 147 aaKnown RBP12.75□□□□□ -0.37
CLIP2-203ENST00000395060 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
CLIP2-203ENST00000395060 DCDP81605 110 aaKnown RBP12.74□□□□□ -0.37
CLIP2-203ENST00000395060 TEX30Q5JUR7 227 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 MAMDC2Q7Z304 686 aaPredicted RBP12.74□□□□□ -0.37
CLIP2-203ENST00000395060 TCEAL3Q969E4 200 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 EIF5A2Q9GZV4 153 aaKnown RBP12.74□□□□□ -0.37
CLIP2-203ENST00000395060 POLR1DQ9Y2S0 133 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 CLDN16Q9Y5I7 305 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 IGLV1-36A0A0B4J1U3 117 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 A6NCN8 305 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 OR3A4PP47883 348 aa12.74□□□□□ -0.37
CLIP2-203ENST00000395060 SCAND1P57086 179 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms