RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 NUDT21O43809 227 aaKnown RBP16.87■□□□□ 0.29
HOXC6-202ENST00000394331 NPIPA8P0DM63 369 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 OR8G3PP0DMU2 310 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 TBPP20226 339 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 VAMP1P23763 118 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 TMEFF1Q8IYR6 380 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 CASTOR1Q8WTX7 329 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 PTX4Q96A99 478 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 OR5AC2Q9NZP5 309 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 USP36Q9P275 1121 aaKnown RBP16.87■□□□□ 0.29
HOXC6-202ENST00000394331 MARCH11A6NNE9 402 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 SYT7O43581 403 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 TMPPEQ6ZT21 453 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 RNF128Q8TEB7 428 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 R3HDM4Q96D70 268 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 C20orf24Q9BUV8 137 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 SLC35B3Q9H1N7 401 aa16.87■□□□□ 0.29
HOXC6-202ENST00000394331 A0A087WWC5 75 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 GMFGO60234 142 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST1H2BKO60814 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 JTBO76095 146 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 RPP14O95059 124 aaKnown RBP16.86■□□□□ 0.29
HOXC6-202ENST00000394331 GPANK1O95872 356 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST1H2BJP06899 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST1H2BOP23527 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST1H2BBP33778 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST1H2BDP58876 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 YPEL5P62699 121 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST1H2BCP62807 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 TNFRSF9Q07011 255 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 MGAT2Q10469 447 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST2H2BEQ16778 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.86■□□□□ 0.29
HOXC6-202ENST00000394331 PRSS41Q7RTY9 318 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 OR6K6Q8NGW6 343 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST1H2BHQ93079 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST1H2BNQ99877 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 HIST1H2BMQ99879 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 C19orf12Q9NSK7 152 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 PLA2G2EQ9NZK7 142 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 ZNF84P51523 738 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 PMPCAQ10713 525 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 EXOSC7Q15024 291 aaKnown RBP16.86■□□□□ 0.29
HOXC6-202ENST00000394331 COL13A1Q5TAT6 717 aaPredicted RBP16.86■□□□□ 0.29
HOXC6-202ENST00000394331 ZNF627Q7L945 461 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 TMEM52Q8NDY8 209 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 OR9K2Q8NGE7 335 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 ZNF563Q8TA94 476 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 ZNF587Q96SQ5 575 aaPredicted RBP16.86■□□□□ 0.29
HOXC6-202ENST00000394331 PRO1933Q9H354 126 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 PSMD9O00233 223 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 SFTPBP07988 381 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 RNF44Q7L0R7 432 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 ZNF676Q8N7Q3 588 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 SNIP1Q8TAD8 396 aaKnown RBP16.86■□□□□ 0.29
HOXC6-202ENST00000394331 FAM174AQ8TBP5 190 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 CTHRC1Q96CG8 243 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 NTNG2Q96CW9 530 aa16.86■□□□□ 0.29
HOXC6-202ENST00000394331 RAB27BO00194 218 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 LINC01565O15544 149 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 NKX2-2O95096 273 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 SOD3P08294 240 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 PVRP15151 417 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 LMO1P25800 156 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 SLC25A1P53007 311 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 SPNS3Q6ZMD2 512 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 CA13Q8N1Q1 262 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 CSNK1A1LQ8N752 337 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 ADAD2Q8NCV1 583 aaKnown RBP16.85■□□□□ 0.29
HOXC6-202ENST00000394331 RCBTB1Q8NDN9 531 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 OR10AD1Q8NGE0 317 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 MRGPRX1Q96LB2 322 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 KCNJ16Q9NPI9 418 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 CCDC187A0A096LP49 1063 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 A0A0J9YY10 115 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 LDLRAD4O15165 306 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 FGF7P21781 194 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 UBE2V2Q15819 145 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 USF2Q15853 346 aaPredicted RBP16.85■□□□□ 0.29
HOXC6-202ENST00000394331 C14orf28Q4W4Y0 310 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 LRRC18Q8N456 261 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 AQP3Q92482 292 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 NMNAT3Q96T66 252 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 ALG12Q9BV10 488 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 KCNK15Q9H427 330 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 FAM212BQ9NTI7 297 aaPredicted RBP16.85■□□□□ 0.29
HOXC6-202ENST00000394331 ATG2BQ96BY7 2078 aa16.85■□□□□ 0.29
HOXC6-202ENST00000394331 CT62P0C5K7 136 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 AKT2P31751 481 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 CTHP32929 405 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 PCP4P48539 62 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 NKX6-1P78426 367 aaPredicted RBP16.84■□□□□ 0.29
HOXC6-202ENST00000394331 DMWDQ09019 674 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 IL15RAQ13261 267 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 C9orf50Q5SZB4 431 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 ZNF529Q6P280 563 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 OPN5Q6U736 354 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 ADGRE4PQ86SQ3 457 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 KDM8Q8N371 416 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 HPSE2Q8WWQ2 592 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms