RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 AP3S2P59780 193 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 SNRPD2P62316 118 aaKnown RBP13.25□□□□□ -0.29
GPC3-202ENST00000394299 MRPS10P82664 201 aaKnown RBP13.25□□□□□ -0.29
GPC3-202ENST00000394299 PMPCAQ10713 525 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 BCL2A1Q16548 175 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 ADGRE4PQ86SQ3 457 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 GJC3Q8NFK1 279 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 SEH1LQ96EE3 360 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 SORCS2Q96PQ0 1159 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 TMEM246Q9BRR3 403 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 SPENQ96T58 3664 aaKnown RBP13.24□□□□□ -0.29
GPC3-202ENST00000394299 TMEM235A6NFC5 223 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 ZNHIT1O43257 154 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 YES1P07947 543 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 GTF2F2P13984 249 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 RAB3AP20336 220 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 MAGEA5P43359 124 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 FAPQ12884 760 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 SRSF6Q13247 344 aaKnown RBP13.24□□□□□ -0.29
GPC3-202ENST00000394299 MAB21L1Q13394 359 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 OLFML2AQ68BL7 652 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 SLC25A25Q6KCM7 469 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 AAED1Q7RTV5 226 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 ANGPTL5Q86XS5 388 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 OR5AS1Q8N127 324 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 DEFB124Q8NES8 71 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 NPRL2Q8WTW4 380 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 PGAM5Q96HS1 289 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 UTP23Q9BRU9 249 aaKnown RBP13.24□□□□□ -0.29
GPC3-202ENST00000394299 PLEK2Q9NYT0 353 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 SPAARA0A1B0GVQ0 90 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 VSIG8P0DPA2 414 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 GABRA1P14867 456 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 B4GALT1P15291 398 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 STOMP27105 288 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 GZMKP49863 264 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 ZNF133P52736 654 aaPredicted RBP13.24□□□□□ -0.29
GPC3-202ENST00000394299 EIF3IQ13347 325 aaKnown RBP13.24□□□□□ -0.29
GPC3-202ENST00000394299 SFRP5Q5T4F7 317 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 RHOUQ7L0Q8 258 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 FGFBP3Q8TAT2 258 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 SF3B5Q9BWJ5 86 aaKnown RBP13.24□□□□□ -0.29
GPC3-202ENST00000394299 SLC6A15Q9H2J7 730 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 NIPAL2Q9H841 368 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 KIAA1549Q9HCM3 1950 aa13.24□□□□□ -0.29
GPC3-202ENST00000394299 IGKV1-9A0A0C4DH69 117 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 A0A1W2PP11 408 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 STMND1H3BQB6 276 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 GALR2O43603 387 aaPredicted RBP13.23□□□□□ -0.29
GPC3-202ENST00000394299 PEX14O75381 377 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 ZNF93P35789 620 aaPredicted RBP13.23□□□□□ -0.29
GPC3-202ENST00000394299 GRB2P62993 217 aaKnown RBP13.23□□□□□ -0.29
GPC3-202ENST00000394299 CDK10Q15131 360 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 ZNF529Q6P280 563 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 FOXL2NBQ6ZUU3 175 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 GPX8Q8TED1 209 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 SLC17A5Q9NRA2 495 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 ITGB1BP2Q9UKP3 347 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 CNOT1A5YKK6 2376 aaKnown RBP13.23□□□□□ -0.29
GPC3-202ENST00000394299 FAM186AA6NE01 2351 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 PYCARD-AS1I3L0S3 204 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 SSNA1O43805 119 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 OR3A4PP47883 348 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 CSRP2Q16527 193 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 SNAI3Q3KNW1 292 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 ELFN2Q5R3F8 820 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 GALNTL5Q7Z4T8 443 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 NKAIN3Q8N8D7 197 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 OR51S1Q8NGJ8 323 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 OR52B4Q8NGK2 314 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 OR14K1Q8NGZ2 314 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 FAM173AQ9BQD7 235 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 NICN1Q9BSH3 213 aa13.23□□□□□ -0.29
GPC3-202ENST00000394299 ZNF703Q9H7S9 590 aaPredicted RBP13.23□□□□□ -0.29
GPC3-202ENST00000394299 BOKQ9UMX3 212 aaPredicted RBP13.23□□□□□ -0.29
GPC3-202ENST00000394299 NAP1L6A6NFF2 107 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 M0QYG6 137 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 RAB27BO00194 218 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 ICMTO60725 284 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 C1QBP02746 253 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 ZNF84P51523 738 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 ZP1P60852 638 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 QRFPP83859 136 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 HGFACQ04756 655 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 C3AR1Q16581 482 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 SLC22A6Q4U2R8 563 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 AWAT2Q6E213 333 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 ZNF774Q6NX45 483 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 ZNF782Q6ZMW2 699 aaPredicted RBP13.22□□□□□ -0.29
GPC3-202ENST00000394299 SLC22A24Q8N4F4 322 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 CHST4Q8NCG5 386 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 TMEM104Q8NE00 496 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 OR4S1Q8NGB4 309 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 OR5D18Q8NGL1 313 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 AKR7LQ8NHP1 331 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 C15orf40Q8WUR7 153 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 TTTY12Q9BZ98 90 aa13.22□□□□□ -0.29
GPC3-202ENST00000394299 METTL17Q9H7H0 456 aaPredicted RBP13.22□□□□□ -0.29
GPC3-202ENST00000394299 MOB1AQ9H8S9 216 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms