RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 A0A0U1RQV5 110 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 LINC00854A0A1B0GVQ3 168 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 MEGF11A6BM72 1044 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 TMEM127O75204 238 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 APOA1P02647 267 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 ADRB1P08588 477 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 ITGA5P08648 1049 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 OCMP0CE72 109 aaPredicted RBP7.54□□□□□ -1.2
TDP1-203ENST00000393454 CALCBP10092 127 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 RAB3AP20336 220 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 ARR3P36575 388 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 RAB1AP62820 205 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 BAK1Q16611 211 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 TRIM16LQ309B1 348 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 SNAI3Q3KNW1 292 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 NSUN5P2Q63ZY6 315 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 ZNF627Q7L945 461 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 CENPSQ8N2Z9 138 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 GDPD1Q8N9F7 314 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 POC5Q8NA72 575 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 CPEB3Q8NE35 698 aaKnown RBP7.54□□□□□ -1.2
TDP1-203ENST00000393454 OR52H1Q8NGJ2 320 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 LYZL4Q96KX0 146 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 MRI1Q9BV20 369 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 ZNF224Q9NZL3 707 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 OR5V1Q9UGF6 321 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 MRPS7Q9Y2R9 242 aaKnown RBP7.54□□□□□ -1.2
TDP1-203ENST00000393454 A0A0G2JMP0 313 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 A0A0X1KG70 313 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 CIB4A0PJX0 185 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 ISPDA4D126 451 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 MTRF1O75570 445 aaKnown RBP7.53□□□□□ -1.2
TDP1-203ENST00000393454 UBL3O95164 117 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 IL18BPO95998 194 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 CCL1P22362 96 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 PTBP1P26599 531 aaKnown RBP eCLIP7.53□□□□□ -1.25e-6■■□□□ 13.3
TDP1-203ENST00000393454 BDKRB2P30411 391 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 DDOSTP39656 456 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 KIR2DL2P43627 348 aaPredicted RBP7.53□□□□□ -1.2
TDP1-203ENST00000393454 DEFA1P59665 94 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 DEFA3P59666 94 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 HGFACQ04756 655 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 PLP2Q04941 152 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 FOXF2Q12947 444 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 GLYATL3Q5SZD4 288 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 VWA1Q6PCB0 445 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 TFAP2EQ6VUC0 442 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 PGAP1Q75T13 922 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 CD163Q86VB7 1156 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 CMTM4Q8IZR5 234 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 Q8N402 240 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 OR4M2Q8NGB6 313 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 OR51D1Q8NGF3 324 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 OR6K3Q8NGY3 331 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 OR2AE1Q8NHA4 323 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 SYNPRQ8TBG9 265 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 NANOS1Q8WY41 292 aaKnown RBP7.53□□□□□ -1.2
TDP1-203ENST00000393454 SGK3Q96BR1 496 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 REEP6Q96HR9 211 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 SOSTQ9BQB4 213 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 PPP1R3EQ9H7J1 279 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 BOD1L1Q8NFC6 3051 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 C5orf49A4QMS7 147 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 ZNF503-AS2A6NEH8 195 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 FIGNL2A6NMB9 653 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 TTLL8A6PVC2 850 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 SLC17A2O00624 439 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 WDR1O75083 606 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 RAD51DO75771 328 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 DHRS3O75911 302 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 LYZL6O75951 148 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 IL7P13232 177 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 CCL2P13500 99 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 GABRA1P14867 456 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 STOMP27105 288 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 HTR2CP28335 458 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 PITPNBP48739 271 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 INPP1P49441 399 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 ART1P52961 327 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 TGFBR3Q03167 851 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 TAB1Q15750 504 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 TBRG1Q3YBR2 411 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 C1orf185Q5T7R7 199 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 TRIQKQ629K1 86 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 C3P1Q6ZMU1 363 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 IZUMO1Q8IYV9 350 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 NKAIN3Q8N8D7 197 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 OR14K1Q8NGZ2 314 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 CHPT1Q8WUD6 406 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 BCL2L2Q92843 193 aaPredicted RBP7.53□□□□□ -1.2
TDP1-203ENST00000393454 FAM3DQ96BQ1 224 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 S100A16Q96FQ6 103 aaKnown RBP7.53□□□□□ -1.2
TDP1-203ENST00000393454 CMTM3Q96MX0 182 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 NOX3Q9HBY0 568 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 TMEM138Q9NPI0 162 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 PROCRQ9UNN8 238 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 PIGLQ9Y2B2 252 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 ETV7Q9Y603 341 aa7.53□□□□□ -1.2
TDP1-203ENST00000393454 A0A1W2PQ09 198 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 C1QTNF9BB2RNN3 333 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms