RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 HDDC2Q7Z4H3 204 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 SPACA5Q96QH8 159 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 PIEZO2Q9H5I5 2752 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 SLC7A10Q9NS82 523 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 CDV3Q9UKY7 258 aaKnown RBP13.14□□□□□ -0.31
MKS1-202ENST00000393119 NOSIPQ9Y314 301 aaKnown RBP13.14□□□□□ -0.31
MKS1-202ENST00000393119 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 SMLR1H3BR10 107 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 AIPO00170 330 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 BET1O15155 118 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 ANXA2P07355 339 aaKnown RBP13.14□□□□□ -0.31
MKS1-202ENST00000393119 NPR2P20594 1047 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 SRP9P49458 86 aaKnown RBP13.14□□□□□ -0.31
MKS1-202ENST00000393119 MMP16P51512 607 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 KCNMB1Q16558 191 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 IGF2-ASQ6U949 168 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 ASB18Q6ZVZ8 466 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 COMMD2Q86X83 199 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 ZNF283Q8N7M2 679 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 OR51D1Q8NGF3 324 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 ACOT12Q8WYK0 555 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 CYYR1Q96J86 154 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 FAM71F1Q96KD3 344 aaPredicted RBP13.14□□□□□ -0.31
MKS1-202ENST00000393119 PRRG4Q9BZD6 226 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 C12orf49Q9H741 205 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 HEXA-AS1Q9H8Q6 139 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 CAMK2AQ9UQM7 478 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 PCDHGA9Q9Y5G4 932 aaKnown RBP13.14□□□□□ -0.31
MKS1-202ENST00000393119 TRGV5A0A0B4J1U4 118 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 A0A1B0GTI1 187 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 DNPH1O43598 174 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 MRPL28Q13084 256 aaKnown RBP13.13□□□□□ -0.31
MKS1-202ENST00000393119 LUZP2Q86TE4 346 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 GPR137CQ8N3F9 429 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 OR1J2Q8NGS2 313 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 WDYHV1Q96HA8 205 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 GPR35Q9HC97 309 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 DOCK7Q96N67 2140 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 LYRM1O43325 122 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 GUCA1AP43080 201 aaPredicted RBP13.13□□□□□ -0.31
MKS1-202ENST00000393119 SLC6A9P48067 706 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 ZNF133P52736 654 aaPredicted RBP13.13□□□□□ -0.31
MKS1-202ENST00000393119 OR10K2Q6IF99 312 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 LRRC28Q86X40 367 aaPredicted RBP13.13□□□□□ -0.31
MKS1-202ENST00000393119 SKA3Q8IX90 412 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 MEIOBQ8N635 442 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 OR5M9Q8NGP3 310 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 SCNM1Q9BWG6 230 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 PLEK2Q9NYT0 353 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 HHLA2Q9UM44 414 aa13.13□□□□□ -0.31
MKS1-202ENST00000393119 ZNF503-AS2A6NEH8 195 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 EEF1E1O43324 174 aaKnown RBP13.12□□□□□ -0.31
MKS1-202ENST00000393119 SLC19A2O60779 497 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 MRPL33O75394 65 aaKnown RBP13.12□□□□□ -0.31
MKS1-202ENST00000393119 FCER2P06734 321 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 CD3GP09693 182 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 CFL1P23528 166 aaKnown RBP13.12□□□□□ -0.31
MKS1-202ENST00000393119 RAB25P57735 213 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 DEGS2Q6QHC5 323 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 TEX261Q6UWH6 196 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 ABHD12BQ7Z5M8 362 aaPredicted RBP13.12□□□□□ -0.31
MKS1-202ENST00000393119 LYZL4Q96KX0 146 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 WACQ9BTA9 647 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 GPR84Q9NQS5 396 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 TMEM38BQ9NVV0 291 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 SPATA2Q9UM82 520 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 U3KQ87 197 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 RPS10-NUDT3A0A1W2PQS6 291 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 SYT7O43581 403 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 ZNF32P17041 273 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 MAPK3P27361 379 aaPredicted RBP13.12□□□□□ -0.31
MKS1-202ENST00000393119 GNALP38405 381 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 DGCR2P98153 550 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 SNAI3Q3KNW1 292 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 FOXL2NBQ6ZUU3 175 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 TMEM178AQ8NBL3 297 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 KCTD12Q96CX2 325 aaKnown RBP13.12□□□□□ -0.31
MKS1-202ENST00000393119 TAAR6Q96RI8 345 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 SLITRK2Q9H156 845 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 AUNIPQ9H7T9 357 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
MKS1-202ENST00000393119 NLKQ9UBE8 527 aa13.12□□□□□ -0.31
MKS1-202ENST00000393119 SVILO95425 2214 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 HSPB2A8KAH6 182 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 ZNF891A8MT65 544 aaPredicted RBP13.11□□□□□ -0.31
MKS1-202ENST00000393119 KRT33AO76009 404 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 ZNF84P51523 738 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 PSMA6P60900 246 aaKnown RBP13.11□□□□□ -0.31
MKS1-202ENST00000393119 LSM6P62312 80 aaKnown RBP13.11□□□□□ -0.31
MKS1-202ENST00000393119 HSPB2Q16082 182 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 MZT2BQ6NZ67 158 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 OR2AE1Q8NHA4 323 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 SYNPRQ8TBG9 265 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 LRRC20Q8TCA0 184 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 PHYHIPQ92561 330 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 FOXB1Q99853 325 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 ZDHHC11Q9H8X9 412 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 ACKR4Q9NPB9 350 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 PRSS50Q9UI38 385 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms