RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 A0A087WUJ7 227 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 ZIC2O95409 532 aaPredicted RBP11.87□□□□□ -0.51
LCA5-202ENST00000392959 GALP22466 123 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 CCR2P41597 374 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 TLE1Q04724 770 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 OR8B8Q15620 311 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 OR5AS1Q8N127 324 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 DTWD2Q8NBA8 298 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 TMEM229BQ8NBD8 167 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 CMTM2Q8TAZ6 248 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 CMTM3Q96MX0 182 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 OR8B4Q96RC9 309 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 ALS2Q96Q42 1657 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 ZNF891A8MT65 544 aaPredicted RBP11.87□□□□□ -0.51
LCA5-202ENST00000392959 SSSCA1O60232 199 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 TBX19O60806 448 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 APOA2P02652 100 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 RAE1P78406 368 aaKnown RBP11.87□□□□□ -0.51
LCA5-202ENST00000392959 CLN3Q13286 438 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 ENDOGQ14249 297 aaKnown RBP11.87□□□□□ -0.51
LCA5-202ENST00000392959 TMEM128Q5BJH2 165 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 LHFPL2Q6ZUX7 228 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 FAM58AQ8N1B3 248 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 ARRDC1Q8N5I2 433 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 OR5AP2Q8NGF4 316 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 HLA-CQ95604 372 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 C8orf44Q96CB5 159 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 MRGPRX4Q96LA9 322 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 SLC23A1Q9UHI7 598 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 PHIPQ8WWQ0 1821 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 CXorf51AA0A1B0GTR3 108 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 FAM166BA8MTA8 275 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 RAB27BO00194 218 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 PIGPP57054 158 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 RBPJQ06330 500 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 SHARPINQ9H0F6 387 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 GDF2Q9UK05 429 aaPredicted RBP11.86□□□□□ -0.51
LCA5-202ENST00000392959 DDX60LQ5H9U9 1706 aaKnown RBP11.86□□□□□ -0.51
LCA5-202ENST00000392959 RFPL4AA6NLU0 287 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 RFPL4AL1F8VTS6 287 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 NDUFB6O95139 128 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 THNSL2Q86YJ6 484 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 ZFP62Q8NB50 900 aaPredicted RBP11.86□□□□□ -0.51
LCA5-202ENST00000392959 CCDC74AQ96AQ1 378 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 PELI1Q96FA3 418 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 ZNF331Q9NQX6 463 aaPredicted RBP11.86□□□□□ -0.51
LCA5-202ENST00000392959 FRG2CA6NGY1 282 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 XRCC2O43543 280 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 PLPP2O43688 288 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 AVPR2P30518 371 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 RAG2P55895 527 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 NT5CQ8TCD5 201 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 MYH14Q7Z406 1995 aaKnown RBP11.86□□□□□ -0.51
LCA5-202ENST00000392959 DHHO43323 396 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 TGOLN2O43493 480 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 PLRG1O43660 514 aaKnown RBP11.86□□□□□ -0.51
LCA5-202ENST00000392959 CCR5P51681 352 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 BHLHA9Q7RTU4 235 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 OTOSQ8NHW6 89 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 TINAGL1Q9GZM7 467 aaPredicted RBP11.86□□□□□ -0.51
LCA5-202ENST00000392959 RIMS4Q9H426 269 aaPredicted RBP11.86□□□□□ -0.51
LCA5-202ENST00000392959 SLC17A4Q9Y2C5 497 aa11.86□□□□□ -0.51
LCA5-202ENST00000392959 GFERP55789 205 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 ZNF561Q8N587 486 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 OR10P1Q8NGE3 313 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 RXFP4Q8TDU9 374 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 H1FXQ92522 213 aaKnown RBP11.85□□□□□ -0.51
LCA5-202ENST00000392959 REEP6Q96HR9 211 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 OPA3Q9H6K4 179 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 UFSP2Q9NUQ7 469 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 SLX4Q8IY92 1834 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 KCNE1BA0A087WTH5 132 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 A0A0B4J2E0 115 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 A0A1B0GX12 115 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 TOMM34Q15785 309 aaPredicted RBP11.85□□□□□ -0.51
LCA5-202ENST00000392959 C11orf87Q6NUJ2 197 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 SLC25A26Q70HW3 274 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 CLRN3Q8NCR9 226 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 C11orf40Q8WZ69 217 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 RPUSD4Q96CM3 377 aaKnown RBP11.85□□□□□ -0.51
LCA5-202ENST00000392959 PPP1R3CQ9UQK1 317 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 APC2O95996 2303 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 SERPINE3A8MV23 424 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 CXCL13O43927 109 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 WNT11O96014 354 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 OR10J4P0C629 311 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 ACSM4P0C7M7 580 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 PTHLHP12272 177 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 PCMT1P22061 227 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 ZNF121P58317 390 aaPredicted RBP11.85□□□□□ -0.51
LCA5-202ENST00000392959 ZNF628Q5EBL2 1059 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 TMEM196Q5HYL7 178 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 PTCRAQ6ISU1 281 aaPredicted RBP11.85□□□□□ -0.51
LCA5-202ENST00000392959 OR4S1Q8NGB4 309 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 TPPP3Q9BW30 176 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 MAGT1Q9H0U3 335 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 ZNF576Q9H609 170 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 CRLF2Q9HC73 371 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms