RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ARF1P84077 181 aaKnown RBP10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 SPOCK1Q08629 439 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 C1orf100Q5SVJ3 147 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 HACD4Q5VWC8 232 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 NUFIP2Q7Z417 695 aaKnown RBP10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 NRARPQ7Z6K4 114 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 SIAH3Q8IW03 269 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZNF100Q8IYN0 542 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 CCDC54Q8NEL0 328 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR1M1Q8NGA1 313 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR52H1Q8NGJ2 320 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR6M1Q8NGM8 313 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 SLC7A6Q92536 515 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 TRIM63Q969Q1 353 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 SLC25A28Q96A46 364 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 RFT1Q96AA3 541 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 FAM3DQ96BQ1 224 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 THAP7Q9BT49 309 aaPredicted RBP10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 SLC22A4Q9H015 551 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 WNT5BQ9H1J7 359 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 TMEM138Q9NPI0 162 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 GLRX2Q9NS18 164 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 RHBDL2Q9NX52 303 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 CLCF1Q9UBD9 225 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 PRELID1Q9Y255 219 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 LOC100289279A0A1B0GTE1 492 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 SSX4O60224 188 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 HTR2CP28335 458 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 GNALP38405 381 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 MNDAP41218 407 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 TPTEP56180 551 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 CTAG1AP78358 180 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 Q6ZS92 163 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 PGAP1Q75T13 922 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR51D1Q8NGF3 324 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR14K1Q8NGZ2 314 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 FGFBP3Q8TAT2 258 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 SARAFQ96BY9 339 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 GMPPAQ96IJ6 420 aaPredicted RBP10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 FAM71F1Q96KD3 344 aaPredicted RBP10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 LYZL4Q96KX0 146 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 TAAR6Q96RI8 345 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 SOX7Q9BT81 388 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 C11orf54Q9H0W9 315 aaPredicted RBP10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 ATPIF1Q9UII2 106 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 MED12LQ86YW9 2145 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 GSTZ1O43708 216 aaPredicted RBP10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 SS18L1O75177 396 aaPredicted RBP10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 RAB3AP20336 220 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 POU3F4P49335 361 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 INPP1P49441 399 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 CAPZA1P52907 286 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 C2orf76Q3KRA6 126 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 SLC36A2Q495M3 483 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 GLYATL3Q5SZD4 288 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 AKR7LQ8NHP1 331 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR10A2Q9H208 303 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZNF224Q9NZL3 707 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 RHBDD3Q9Y3P4 386 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 V9GYS6 101 aa10.01□□□□□ -0.81
SMARCAL1-203ENST00000392128 LINC00854A0A1B0GVQ3 168 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 C5orf63A6NC05 138 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 SULT1B1O43704 296 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 DHRS3O75911 302 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 ERCC1P07992 297 aaPredicted RBP10□□□□□ -0.81
SMARCAL1-203ENST00000392128 PATE4P0C8F1 98 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 HTR5AP47898 357 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 TMEM53Q6P2H8 277 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 P4HA3Q7Z4N8 544 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 FGD2Q7Z6J4 655 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 JAGN1Q8N5M9 183 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 C15orf40Q8WUR7 153 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 SORCS2Q96PQ0 1159 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 UQCC2Q9BRT2 126 aa10□□□□□ -0.81
SMARCAL1-203ENST00000392128 METTL17Q9H7H0 456 aaPredicted RBP10□□□□□ -0.81
SMARCAL1-203ENST00000392128 CGGBP1Q9UFW8 167 aaPredicted RBP10□□□□□ -0.81
SMARCAL1-203ENST00000392128 EEF1E1O43324 174 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 LANCL1O43813 399 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 PDGFAP04085 211 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 ABOP16442 354 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 CDK2P24941 298 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 EIF2S3P41091 472 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 FAPQ12884 760 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 GFOD2Q3B7J2 385 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 TMEM69Q5SWH9 247 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 SFRP5Q5T4F7 317 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 ANKRD16Q6P6B7 361 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 CDH26Q8IXH8 852 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 UBE2J2Q8N2K1 259 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR13C9Q8NGT0 318 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 SMIM4Q8WVI0 70 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 YIPF5Q969M3 257 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 C10orf35Q96D05 121 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZFP3Q96NJ6 502 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 PLEKHA1Q9HB21 404 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 MRPS7Q9Y2R9 242 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 MSRB2Q9Y3D2 182 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 TMEM272A0A1B0GTI8 110 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 LYRM1O43325 122 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 WISP2O76076 250 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms