RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 HACD4Q5VWC8 232 aa11.71□□□□□ -0.54
PTPRN2-202ENST00000389416 FBXW12Q6X9E4 464 aa11.71□□□□□ -0.54
PTPRN2-202ENST00000389416 SUN5Q8TC36 379 aa11.71□□□□□ -0.54
PTPRN2-202ENST00000389416 SPIN2AQ99865 258 aa11.71□□□□□ -0.54
PTPRN2-202ENST00000389416 SPIN2BQ9BPZ2 258 aa11.71□□□□□ -0.54
PTPRN2-202ENST00000389416 DDA1Q9BW61 102 aa11.71□□□□□ -0.54
PTPRN2-202ENST00000389416 MDC1Q14676 2089 aaKnown RBP11.71□□□□□ -0.54
PTPRN2-202ENST00000389416 LRRC30A6NM36 301 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 HSPB2A8KAH6 182 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 F5H5P2 479 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 ANGPTL7O43827 346 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 IFNA5P01569 189 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 SP1P08047 785 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 RAD52P43351 418 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 SELENOPP49908 381 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 ZNF83P51522 516 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 CYCSP99999 105 aaKnown RBP11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 HSPB2Q16082 182 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 MESTQ5EB52 335 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 TUSC5Q8IXB3 177 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 FAM109AQ8N4B1 249 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 OR52I2Q8NH67 350 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 ZFAND1Q8TCF1 268 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 PTP4A1Q93096 173 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 ELMOD3Q96FG2 381 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 TRAPPC4Q9Y296 219 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 MUC6Q6W4X9 2439 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 IGHV1-45A0A0A0MS14 117 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 NDUFB7P17568 137 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 CSRP2Q16527 193 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 SLC25A35Q3KQZ1 300 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 ALKBH6Q3KRA9 238 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 APH1BQ8WW43 257 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 TRIM64A6NGJ6 449 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 MPPED1O15442 326 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 OPRM1P35372 400 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 DLX5P56178 289 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 XAF1Q6GPH4 301 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 GIMAP1Q8WWP7 306 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 HYLS1Q96M11 299 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 COL4A6Q14031 1691 aa11.7□□□□□ -0.54
PTPRN2-202ENST00000389416 PIGBOS1A0A0B4J2F0 54 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 E9PI62 339 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 EPPINO95925 133 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 HLA-DOBP13765 273 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 ERP29P30040 261 aaKnown RBP11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 GDPD3Q7L5L3 318 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 TMEM185AQ8NFB2 350 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 APOBEC3DQ96AK3 386 aaPredicted RBP11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 RAB39BQ96DA2 213 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 PPIL3Q9H2H8 161 aaKnown RBP11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 POLDIP2Q9Y2S7 368 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 GMEB1Q9Y692 573 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 FAM90A27PA6NNH2 459 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 PEX14O75381 377 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 AADACL3Q5VUY0 350 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 SLC38A9Q8NBW4 561 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 C17orf47Q8NEP4 570 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 OR6X1Q8NH79 312 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 C4orf45Q96LM5 186 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 NYNRINQ9P2P1 1898 aaKnown RBP11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 CD300LBA8K4G0 201 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 TSPAN2O60636 221 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 GLI4P10075 376 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 NFYBP25208 207 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 DGCR2P98153 550 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 AGAP6Q5VW22 663 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 GPR155Q7Z3F1 870 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 NPEPL1Q8NDH3 523 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 NUDCD2Q8WVJ2 157 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 PSD2Q9BQI7 771 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 TGIF2Q9GZN2 237 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 C12orf4Q9NQ89 552 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 TCRBP04435 133 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 SELEP16581 610 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 TAS2R20P59543 309 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 PMP22Q01453 160 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 ZNF574Q6ZN55 896 aaPredicted RBP11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 ZDHHC23Q8IYP9 409 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 CMTM4Q8IZR5 234 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 DCUN1D4Q92564 292 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 FAM234AQ9H0X4 552 aa11.69□□□□□ -0.54
PTPRN2-202ENST00000389416 ALDOBP05062 364 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 ALOX5APP20292 161 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 NPY4RP50391 375 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 CLDN20P56880 219 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 ACTBL2Q562R1 376 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 FAM198BQ6UWH4 519 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 ZNF573Q86YE8 665 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 OR51A2Q8NGJ7 313 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 GLYATL2Q8WU03 294 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 CTHRC1Q96CG8 243 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 FBXO17Q96EF6 278 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 KCNE5Q9UJ90 142 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 PRELID1Q9Y255 219 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 DOCK4Q8N1I0 1966 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 H3BMH7 237 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 I3L521 148 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 EPXP11678 715 aa11.68□□□□□ -0.54
PTPRN2-202ENST00000389416 RAB35Q15286 201 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms